Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 CYP2D8P-201ENST00000433633 1490 ntBASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 AC008040.2-201ENST00000461049 708 ntBASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 Z85996.1-201ENST00000494644 937 ntBASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 AC097488.1-201ENST00000507834 756 ntBASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 AL160286.2-201ENST00000567150 934 ntBASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 AC084018.2-201ENST00000613093 2607 ntBASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 BCL2-203ENST00000589955 5011 ntBASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBA1CQ9BQE3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBA1CQ9BQE3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TUBA1CQ9BQE3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBA1CQ9BQE3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBA1CQ9BQE3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBA1CQ9BQE3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBA1CQ9BQE3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 NAPSB-206ENST00000562112 1266 ntBASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 AC083906.6-201ENST00000641366 219 ntBASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TUBA1CQ9BQE3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 CRYGFP-201ENST00000418459 633 ntBASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 FAM210CP-201ENST00000445714 574 ntBASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 KRT18P21-201ENST00000515767 1272 ntBASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 SLC25A1P4-201ENST00000567977 778 ntBASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 AP005242.2-201ENST00000580065 1175 ntBASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 AC145285.6-201ENST00000604632 637 ntBASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 AP000692.2-201ENST00000608391 879 ntBASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 AC010947.1-201ENST00000623454 693 ntBASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TUBA1CQ9BQE3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms