Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VRK1Q99986 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VRK1Q99986 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
VRK1Q99986 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
VRK1Q99986 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
VRK1Q99986 SDHAP1-207ENST00000440850 2000 ntBASIC16.21■□□□□ 0.18
VRK1Q99986 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.21■□□□□ 0.18
VRK1Q99986 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.21■□□□□ 0.18
VRK1Q99986 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK1Q99986 AL354751.1-201ENST00000412768 1863 ntBASIC16.2■□□□□ 0.18
VRK1Q99986 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK1Q99986 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK1Q99986 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
VRK1Q99986 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK1Q99986 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.2■□□□□ 0.18
VRK1Q99986 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK1Q99986 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.2■□□□□ 0.18
VRK1Q99986 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VRK1Q99986 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
VRK1Q99986 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK1Q99986 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
VRK1Q99986 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK1Q99986 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK1Q99986 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
VRK1Q99986 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK1Q99986 AC117947.1-201ENST00000427448 529 ntBASIC16.2■□□□□ 0.18
VRK1Q99986 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.2■□□□□ 0.18
VRK1Q99986 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.2■□□□□ 0.18
VRK1Q99986 AC092647.4-201ENST00000457211 535 ntBASIC16.2■□□□□ 0.18
VRK1Q99986 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.2■□□□□ 0.18
VRK1Q99986 COX11P1-201ENST00000489116 835 ntBASIC16.2■□□□□ 0.18
VRK1Q99986 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.2■□□□□ 0.18
VRK1Q99986 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.2■□□□□ 0.18
VRK1Q99986 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK1Q99986 AC140113.3-201ENST00000605663 199 ntBASIC16.2■□□□□ 0.18
VRK1Q99986 AC141257.4-201ENST00000634557 245 ntBASIC16.2■□□□□ 0.18
VRK1Q99986 AC136944.6-201ENST00000634818 245 ntBASIC16.2■□□□□ 0.18
VRK1Q99986 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VRK1Q99986 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.2■□□□□ 0.18
VRK1Q99986 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VRK1Q99986 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.2■□□□□ 0.18
VRK1Q99986 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.2■□□□□ 0.18
VRK1Q99986 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
VRK1Q99986 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.2■□□□□ 0.18
VRK1Q99986 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK1Q99986 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VRK1Q99986 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
VRK1Q99986 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK1Q99986 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.2■□□□□ 0.18
VRK1Q99986 WIZP1-201ENST00000531444 2299 ntBASIC16.2■□□□□ 0.18
VRK1Q99986 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.2■□□□□ 0.18
VRK1Q99986 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.19■□□□□ 0.18
VRK1Q99986 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
VRK1Q99986 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.19■□□□□ 0.18
VRK1Q99986 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
VRK1Q99986 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.19■□□□□ 0.18
VRK1Q99986 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.19■□□□□ 0.18
VRK1Q99986 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
VRK1Q99986 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.19■□□□□ 0.18
VRK1Q99986 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
VRK1Q99986 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 BICD1-207ENST00000551848 1962 ntBASIC16.19■□□□□ 0.18
VRK1Q99986 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.19■□□□□ 0.18
VRK1Q99986 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.19■□□□□ 0.18
VRK1Q99986 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
VRK1Q99986 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.19■□□□□ 0.18
VRK1Q99986 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.19■□□□□ 0.18
VRK1Q99986 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.19■□□□□ 0.18
VRK1Q99986 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.19■□□□□ 0.18
VRK1Q99986 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
VRK1Q99986 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
VRK1Q99986 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.19■□□□□ 0.18
VRK1Q99986 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
VRK1Q99986 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
VRK1Q99986 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
VRK1Q99986 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
VRK1Q99986 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VRK1Q99986 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VRK1Q99986 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK1Q99986 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
VRK1Q99986 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
VRK1Q99986 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms