Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.95■□□□□ 0.94
PTPN18Q99952 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.95■□□□□ 0.94
PTPN18Q99952 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.95■□□□□ 0.94
PTPN18Q99952 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.95■□□□□ 0.94
PTPN18Q99952 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.95■□□□□ 0.94
PTPN18Q99952 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PTPN18Q99952 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN18Q99952 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN18Q99952 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN18Q99952 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN18Q99952 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN18Q99952 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN18Q99952 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PTPN18Q99952 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.95■□□□□ 0.94
PTPN18Q99952 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN18Q99952 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN18Q99952 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN18Q99952 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPN18Q99952 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN18Q99952 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN18Q99952 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPN18Q99952 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN18Q99952 LINC00602-201ENST00000629776 2065 ntBASIC20.94■□□□□ 0.94
PTPN18Q99952 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN18Q99952 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN18Q99952 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN18Q99952 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PTPN18Q99952 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN18Q99952 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN18Q99952 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPN18Q99952 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN18Q99952 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN18Q99952 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN18Q99952 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN18Q99952 MIR3197-201ENST00000582241 73 ntBASIC20.94■□□□□ 0.94
PTPN18Q99952 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.94■□□□□ 0.94
PTPN18Q99952 AL596442.2-201ENST00000610240 980 ntBASIC20.94■□□□□ 0.94
PTPN18Q99952 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN18Q99952 AP000867.4-201ENST00000641616 219 ntBASIC20.94■□□□□ 0.94
PTPN18Q99952 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN18Q99952 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN18Q99952 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN18Q99952 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPN18Q99952 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN18Q99952 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN18Q99952 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPN18Q99952 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PTPN18Q99952 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN18Q99952 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN18Q99952 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN18Q99952 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PTPN18Q99952 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN18Q99952 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.93■□□□□ 0.94
PTPN18Q99952 KRT18P2-201ENST00000447938 1258 ntBASIC20.93■□□□□ 0.94
PTPN18Q99952 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PTPN18Q99952 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.93■□□□□ 0.94
PTPN18Q99952 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PTPN18Q99952 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.93■□□□□ 0.94
PTPN18Q99952 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.93■□□□□ 0.94
PTPN18Q99952 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.93■□□□□ 0.94
PTPN18Q99952 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN18Q99952 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN18Q99952 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN18Q99952 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PTPN18Q99952 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.93■□□□□ 0.94
PTPN18Q99952 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
PTPN18Q99952 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.93■□□□□ 0.94
PTPN18Q99952 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN18Q99952 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN18Q99952 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN18Q99952 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPN18Q99952 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN18Q99952 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PTPN18Q99952 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PTPN18Q99952 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PTPN18Q99952 METTL21AP1-201ENST00000438852 635 ntBASIC20.92■□□□□ 0.94
PTPN18Q99952 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN18Q99952 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.92■□□□□ 0.94
PTPN18Q99952 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.92■□□□□ 0.94
PTPN18Q99952 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN18Q99952 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPN18Q99952 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN18Q99952 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPN18Q99952 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN18Q99952 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPN18Q99952 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN18Q99952 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN18Q99952 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
PTPN18Q99952 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN18Q99952 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN18Q99952 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PTPN18Q99952 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN18Q99952 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPN18Q99952 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN18Q99952 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN18Q99952 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.91■□□□□ 0.94
PTPN18Q99952 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPN18Q99952 LAGE3P1-201ENST00000425356 484 ntBASIC20.91■□□□□ 0.94
PTPN18Q99952 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPN18Q99952 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms