Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB18PQ96TA0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB18PQ96TA0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB18PQ96TA0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB18PQ96TA0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB18PQ96TA0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB18PQ96TA0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB18PQ96TA0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.7
PCDHB18PQ96TA0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 AP000997.3-201ENST00000623333 2250 ntBASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 MIR3180-4-201ENST00000582223 153 ntBASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB18PQ96TA0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB18PQ96TA0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PCDHB18PQ96TA0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB18PQ96TA0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB18PQ96TA0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB18PQ96TA0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB18PQ96TA0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PCDHB18PQ96TA0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB18PQ96TA0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDHB18PQ96TA0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHB18PQ96TA0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDHB18PQ96TA0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHB18PQ96TA0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB18PQ96TA0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB18PQ96TA0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB18PQ96TA0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB18PQ96TA0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB18PQ96TA0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB18PQ96TA0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 FLJ13224-201ENST00000313737 1514 ntBASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB18PQ96TA0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB18PQ96TA0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms