Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM2Q96JY6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDLIM2Q96JY6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDLIM2Q96JY6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
PDLIM2Q96JY6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.27■□□□□ 0.83
PDLIM2Q96JY6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.27■□□□□ 0.83
PDLIM2Q96JY6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDLIM2Q96JY6 MST1L-201ENST00000442552 2185 ntBASIC20.27■□□□□ 0.83
PDLIM2Q96JY6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.26■□□□□ 0.83
PDLIM2Q96JY6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM2Q96JY6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM2Q96JY6 AL513477.1-201ENST00000602865 2407 ntBASIC20.25■□□□□ 0.83
PDLIM2Q96JY6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM2Q96JY6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM2Q96JY6 LINC02199-201ENST00000506655 2702 ntBASIC20.25■□□□□ 0.83
PDLIM2Q96JY6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM2Q96JY6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM2Q96JY6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM2Q96JY6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.25■□□□□ 0.83
PDLIM2Q96JY6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM2Q96JY6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM2Q96JY6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM2Q96JY6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDLIM2Q96JY6 RCC2P3-201ENST00000418112 1537 ntBASIC20.25■□□□□ 0.83
PDLIM2Q96JY6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC20.25■□□□□ 0.83
PDLIM2Q96JY6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms