Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 CHCHD2P8-201ENST00000429873 447 ntBASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 ATP5G2P1-201ENST00000433580 426 ntBASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 AC004408.2-201ENST00000623613 2777 ntBASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 AL353692.3-201ENST00000407031 1396 ntBASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 AC004263.2-201ENST00000617183 678 ntBASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCD1Q96GM5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 NPAP1P7-201ENST00000613027 823 ntBASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 ESPNP-201ENST00000270691 2015 ntBASIC19.24■□□□□ 0.67
SMARCD1Q96GM5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 AC090616.6-201ENST00000582640 721 ntBASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms