Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDCA5Q96FF9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.39■■□□□ 1.02
CDCA5Q96FF9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CDCA5Q96FF9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDCA5Q96FF9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDCA5Q96FF9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDCA5Q96FF9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDCA5Q96FF9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDCA5Q96FF9 LAGE3P1-201ENST00000425356 484 ntBASIC21.39■■□□□ 1.01
CDCA5Q96FF9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDCA5Q96FF9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.39■■□□□ 1.01
CDCA5Q96FF9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.39■■□□□ 1.01
CDCA5Q96FF9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDCA5Q96FF9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDCA5Q96FF9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.39■■□□□ 1.01
CDCA5Q96FF9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDCA5Q96FF9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.39■■□□□ 1.01
CDCA5Q96FF9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDCA5Q96FF9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDCA5Q96FF9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 MIR3197-201ENST00000582241 73 ntBASIC21.38■■□□□ 1.01
CDCA5Q96FF9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 LINC00602-201ENST00000629776 2065 ntBASIC21.38■■□□□ 1.01
CDCA5Q96FF9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDCA5Q96FF9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
CDCA5Q96FF9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDCA5Q96FF9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.37■■□□□ 1.01
CDCA5Q96FF9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDCA5Q96FF9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CDCA5Q96FF9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.37■■□□□ 1.01
CDCA5Q96FF9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.37■■□□□ 1.01
CDCA5Q96FF9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.37■■□□□ 1.01
CDCA5Q96FF9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC21.37■■□□□ 1.01
CDCA5Q96FF9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.37■■□□□ 1.01
CDCA5Q96FF9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.37■■□□□ 1.01
CDCA5Q96FF9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.37■■□□□ 1.01
CDCA5Q96FF9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.37■■□□□ 1.01
CDCA5Q96FF9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC21.37■■□□□ 1.01
CDCA5Q96FF9 AC064836.3-201ENST00000607928 673 ntBASIC21.37■■□□□ 1.01
CDCA5Q96FF9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDCA5Q96FF9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDCA5Q96FF9 SDHAP2-201ENST00000455183 2001 ntBASIC21.37■■□□□ 1.01
CDCA5Q96FF9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDCA5Q96FF9 PKD1P6-201ENST00000343738 4769 ntBASIC21.37■■□□□ 1.01
CDCA5Q96FF9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDCA5Q96FF9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 AL157384.1-201ENST00000445995 2473 ntBASIC21.36■■□□□ 1.01
CDCA5Q96FF9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCA5Q96FF9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDCA5Q96FF9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms