Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC23.55■■□□□ 1.36
ZNF428Q96B54 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
ZNF428Q96B54 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC23.55■■□□□ 1.36
ZNF428Q96B54 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC23.55■■□□□ 1.36
ZNF428Q96B54 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC23.55■■□□□ 1.36
ZNF428Q96B54 BCL10-202ENST00000620248 774 ntTSL 5 BASIC23.55■■□□□ 1.36
ZNF428Q96B54 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ZNF428Q96B54 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
ZNF428Q96B54 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ZNF428Q96B54 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ZNF428Q96B54 PBK-203ENST00000522944 1499 ntTSL 2 BASIC23.55■■□□□ 1.36
ZNF428Q96B54 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC23.55■■□□□ 1.36
ZNF428Q96B54 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
ZNF428Q96B54 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC23.55■■□□□ 1.36
ZNF428Q96B54 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC23.54■■□□□ 1.36
ZNF428Q96B54 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC23.54■■□□□ 1.36
ZNF428Q96B54 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZNF428Q96B54 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ZNF428Q96B54 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZNF428Q96B54 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZNF428Q96B54 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC23.54■■□□□ 1.36
ZNF428Q96B54 KIRREL3-AS3-201ENST00000404882 831 ntBASIC23.54■■□□□ 1.36
ZNF428Q96B54 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ZNF428Q96B54 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC23.54■■□□□ 1.36
ZNF428Q96B54 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZNF428Q96B54 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC23.54■■□□□ 1.36
ZNF428Q96B54 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC23.54■■□□□ 1.36
ZNF428Q96B54 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC23.54■■□□□ 1.36
ZNF428Q96B54 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZNF428Q96B54 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
ZNF428Q96B54 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZNF428Q96B54 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF428Q96B54 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF428Q96B54 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF428Q96B54 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC23.53■■□□□ 1.36
ZNF428Q96B54 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF428Q96B54 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF428Q96B54 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF428Q96B54 HLA-F-220ENST00000434407 884 ntBASIC23.53■■□□□ 1.36
ZNF428Q96B54 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF428Q96B54 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC23.53■■□□□ 1.36
ZNF428Q96B54 KRT126P-201ENST00000549467 1181 ntBASIC23.53■■□□□ 1.36
ZNF428Q96B54 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF428Q96B54 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
ZNF428Q96B54 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF428Q96B54 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF428Q96B54 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF428Q96B54 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF428Q96B54 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC23.53■■□□□ 1.36
ZNF428Q96B54 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC23.53■■□□□ 1.36
ZNF428Q96B54 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF428Q96B54 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF428Q96B54 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZNF428Q96B54 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
ZNF428Q96B54 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC23.52■■□□□ 1.36
ZNF428Q96B54 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ZNF428Q96B54 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZNF428Q96B54 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
ZNF428Q96B54 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZNF428Q96B54 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ZNF428Q96B54 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZNF428Q96B54 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZNF428Q96B54 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ZNF428Q96B54 RNF126P1-202ENST00000569893 925 ntBASIC23.52■■□□□ 1.36
ZNF428Q96B54 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ZNF428Q96B54 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.52■■□□□ 1.36
ZNF428Q96B54 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZNF428Q96B54 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZNF428Q96B54 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZNF428Q96B54 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
ZNF428Q96B54 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ZNF428Q96B54 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ZNF428Q96B54 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
ZNF428Q96B54 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC23.52■■□□□ 1.36
ZNF428Q96B54 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC23.52■■□□□ 1.36
ZNF428Q96B54 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC23.52■■□□□ 1.36
ZNF428Q96B54 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC23.52■■□□□ 1.36
ZNF428Q96B54 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
ZNF428Q96B54 AL354751.1-201ENST00000412768 1863 ntBASIC23.51■■□□□ 1.35
ZNF428Q96B54 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZNF428Q96B54 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZNF428Q96B54 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ZNF428Q96B54 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC23.51■■□□□ 1.35
ZNF428Q96B54 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23.51■■□□□ 1.35
ZNF428Q96B54 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZNF428Q96B54 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZNF428Q96B54 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
ZNF428Q96B54 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
ZNF428Q96B54 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC23.51■■□□□ 1.35
ZNF428Q96B54 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC23.51■■□□□ 1.35
ZNF428Q96B54 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZNF428Q96B54 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC23.51■■□□□ 1.35
ZNF428Q96B54 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZNF428Q96B54 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC23.51■■□□□ 1.35
ZNF428Q96B54 AL391807.1-203ENST00000604392 2365 ntBASIC23.51■■□□□ 1.35
ZNF428Q96B54 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC23.51■■□□□ 1.35
ZNF428Q96B54 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ZNF428Q96B54 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ZNF428Q96B54 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
ZNF428Q96B54 LINC01126-201ENST00000623515 1646 ntBASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms