Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 SLC25A3P1-201ENST00000443844 931 ntBASIC17.65■□□□□ 0.42
UBE2E3Q969T4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
UBE2E3Q969T4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.64■□□□□ 0.41
UBE2E3Q969T4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 ATP5G1P1-201ENST00000448724 379 ntBASIC17.64■□□□□ 0.41
UBE2E3Q969T4 SEC1P-202ENST00000473944 940 ntBASIC17.64■□□□□ 0.41
UBE2E3Q969T4 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 AC024243.1-201ENST00000609234 778 ntBASIC17.64■□□□□ 0.41
UBE2E3Q969T4 AC141257.4-201ENST00000634557 245 ntBASIC17.64■□□□□ 0.41
UBE2E3Q969T4 AC136944.6-201ENST00000634818 245 ntBASIC17.64■□□□□ 0.41
UBE2E3Q969T4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 AC093677.2-201ENST00000600169 1863 ntBASIC17.64■□□□□ 0.41
UBE2E3Q969T4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2E3Q969T4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 AC008687.5-201ENST00000593746 558 ntBASIC17.63■□□□□ 0.41
UBE2E3Q969T4 AC133561.5-201ENST00000635547 218 ntBASIC17.63■□□□□ 0.41
UBE2E3Q969T4 AL031432.5-201ENST00000641059 760 ntBASIC17.63■□□□□ 0.41
UBE2E3Q969T4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.63■□□□□ 0.41
UBE2E3Q969T4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBE2E3Q969T4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
UBE2E3Q969T4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.62■□□□□ 0.41
UBE2E3Q969T4 ESPNP-201ENST00000270691 2015 ntBASIC17.62■□□□□ 0.41
UBE2E3Q969T4 AC135776.1-201ENST00000319817 2481 ntBASIC17.62■□□□□ 0.41
UBE2E3Q969T4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBE2E3Q969T4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBE2E3Q969T4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBE2E3Q969T4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBE2E3Q969T4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBE2E3Q969T4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBE2E3Q969T4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBE2E3Q969T4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBE2E3Q969T4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.62■□□□□ 0.41
UBE2E3Q969T4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
UBE2E3Q969T4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.62■□□□□ 0.41
UBE2E3Q969T4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms