Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 AC034236.2-201ENST00000606662 1610 ntBASIC20.69■□□□□ 0.9
SMARCE1Q969G3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 REXO1L9P-201ENST00000604264 2108 ntBASIC20.69■□□□□ 0.9
SMARCE1Q969G3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 AC138028.4-201ENST00000564984 1845 ntBASIC20.68■□□□□ 0.9
SMARCE1Q969G3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCE1Q969G3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 AC106820.2-201ENST00000563775 3264 ntBASIC20.67■□□□□ 0.9
SMARCE1Q969G3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 RPS2P55-201ENST00000397318 883 ntBASIC20.67■□□□□ 0.9
SMARCE1Q969G3 CA15P1-201ENST00000481698 905 ntBASIC20.67■□□□□ 0.9
SMARCE1Q969G3 AC107956.1-201ENST00000494359 873 ntBASIC20.67■□□□□ 0.9
SMARCE1Q969G3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 KRT8P50-201ENST00000562022 1438 ntBASIC20.67■□□□□ 0.9
SMARCE1Q969G3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCE1Q969G3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCE1Q969G3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCE1Q969G3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.66■□□□□ 0.9
SMARCE1Q969G3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SMARCE1Q969G3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCE1Q969G3 ABHD17AP1-201ENST00000358206 933 ntBASIC20.66■□□□□ 0.9
SMARCE1Q969G3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCE1Q969G3 AC098590.1-201ENST00000468126 897 ntBASIC20.66■□□□□ 0.9
SMARCE1Q969G3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.66■□□□□ 0.9
SMARCE1Q969G3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.66■□□□□ 0.9
SMARCE1Q969G3 AC113410.3-201ENST00000623366 203 ntBASIC20.66■□□□□ 0.9
SMARCE1Q969G3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCE1Q969G3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.66■□□□□ 0.9
SMARCE1Q969G3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
SMARCE1Q969G3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCE1Q969G3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCE1Q969G3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCE1Q969G3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.66■□□□□ 0.9
SMARCE1Q969G3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCE1Q969G3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SMARCE1Q969G3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCE1Q969G3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCE1Q969G3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms