Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
RTF1Q92541 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.42
RTF1Q92541 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RTF1Q92541 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RTF1Q92541 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RTF1Q92541 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RTF1Q92541 NUS1P1-201ENST00000446295 882 ntBASIC23.89■■□□□ 1.41
RTF1Q92541 RN7SL606P-201ENST00000472779 293 ntBASIC23.89■■□□□ 1.41
RTF1Q92541 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC23.89■■□□□ 1.41
RTF1Q92541 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
RTF1Q92541 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC23.89■■□□□ 1.41
RTF1Q92541 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RTF1Q92541 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RTF1Q92541 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RTF1Q92541 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RTF1Q92541 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RTF1Q92541 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
RTF1Q92541 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC23.89■■□□□ 1.41
RTF1Q92541 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RTF1Q92541 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.88■■□□□ 1.41
RTF1Q92541 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTF1Q92541 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RTF1Q92541 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RTF1Q92541 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC23.88■■□□□ 1.41
RTF1Q92541 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RTF1Q92541 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RTF1Q92541 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RTF1Q92541 PNN-202ENST00000553331 656 ntTSL 3 BASIC23.88■■□□□ 1.41
RTF1Q92541 AC012615.1-201ENST00000565797 1299 ntBASIC23.88■■□□□ 1.41
RTF1Q92541 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RTF1Q92541 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC23.88■■□□□ 1.41
RTF1Q92541 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.88■■□□□ 1.41
RTF1Q92541 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
RTF1Q92541 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
RTF1Q92541 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTF1Q92541 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC23.88■■□□□ 1.41
RTF1Q92541 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTF1Q92541 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC23.87■■□□□ 1.41
RTF1Q92541 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTF1Q92541 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTF1Q92541 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC23.87■■□□□ 1.41
RTF1Q92541 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTF1Q92541 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTF1Q92541 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC23.87■■□□□ 1.41
RTF1Q92541 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC23.87■■□□□ 1.41
RTF1Q92541 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTF1Q92541 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC23.87■■□□□ 1.41
RTF1Q92541 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC23.87■■□□□ 1.41
RTF1Q92541 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC23.87■■□□□ 1.41
RTF1Q92541 AL121894.2-201ENST00000602977 491 ntBASIC23.87■■□□□ 1.41
RTF1Q92541 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
RTF1Q92541 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC23.87■■□□□ 1.41
RTF1Q92541 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTF1Q92541 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTF1Q92541 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
RTF1Q92541 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTF1Q92541 AC233702.3-201ENST00000578656 1387 ntBASIC23.87■■□□□ 1.41
RTF1Q92541 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTF1Q92541 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTF1Q92541 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTF1Q92541 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC23.87■■□□□ 1.41
RTF1Q92541 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTF1Q92541 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC23.87■■□□□ 1.41
RTF1Q92541 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC23.87■■□□□ 1.41
RTF1Q92541 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
RTF1Q92541 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
RTF1Q92541 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTF1Q92541 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
RTF1Q92541 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTF1Q92541 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
RTF1Q92541 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTF1Q92541 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTF1Q92541 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC23.86■■□□□ 1.41
RTF1Q92541 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTF1Q92541 DDT-203ENST00000403754 569 ntTSL 3 BASIC23.86■■□□□ 1.41
RTF1Q92541 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RTF1Q92541 DDT-206ENST00000430101 573 ntTSL 2 BASIC23.86■■□□□ 1.41
RTF1Q92541 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
RTF1Q92541 AC104819.1-201ENST00000504587 486 ntBASIC23.86■■□□□ 1.41
RTF1Q92541 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RTF1Q92541 Z69720.1-201ENST00000601483 472 ntBASIC23.86■■□□□ 1.41
RTF1Q92541 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.86■■□□□ 1.41
RTF1Q92541 AL691432.3-201ENST00000621860 400 ntBASIC23.86■■□□□ 1.41
RTF1Q92541 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTF1Q92541 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTF1Q92541 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RTF1Q92541 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RTF1Q92541 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTF1Q92541 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTF1Q92541 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
RTF1Q92541 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTF1Q92541 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTF1Q92541 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RTF1Q92541 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC23.85■■□□□ 1.41
RTF1Q92541 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC23.85■■□□□ 1.41
RTF1Q92541 AC074051.2-201ENST00000565115 352 ntBASIC23.85■■□□□ 1.41
RTF1Q92541 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTF1Q92541 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC23.85■■□□□ 1.41
RTF1Q92541 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTF1Q92541 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms