Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 AL353807.1-201ENST00000427475 662 ntBASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 RN7SL471P-201ENST00000580476 299 ntBASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 PP12613-201ENST00000424958 2230 ntBASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RPS4Y2Q8TD47 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 MESTP1-201ENST00000404287 994 ntBASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 MCCD1P1-208ENST00000445732 328 ntBASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 B3GAT3P1-201ENST00000471720 806 ntBASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 AC142381.4-202ENST00000563973 229 ntBASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.06■□□□□ 0.16
RPS4Y2Q8TD47 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 AL163051.1-201ENST00000569214 1512 ntBASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 AC009053.2-201ENST00000563701 2365 ntBASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 AC096733.2-201ENST00000609937 1394 ntBASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 AL158047.1-201ENST00000445918 881 ntBASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 AP000692.2-201ENST00000608391 879 ntBASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 FAM197Y4-202ENST00000622692 608 ntBASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4Y2Q8TD47 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4Y2Q8TD47 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms