Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 HCG11-201ENST00000411553 5696 ntBASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 RCC2P3-201ENST00000418112 1537 ntBASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 SPDYE13P-201ENST00000445314 798 ntBASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 AC112497.1-201ENST00000624824 639 ntBASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 NOC2LP2-201ENST00000407594 1944 ntBASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 AL512353.2-201ENST00000448759 1962 ntBASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 SEC1P-202ENST00000473944 940 ntBASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
CLDND2Q8NHS1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLDND2Q8NHS1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLDND2Q8NHS1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLDND2Q8NHS1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLDND2Q8NHS1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLDND2Q8NHS1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
CLDND2Q8NHS1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CLDND2Q8NHS1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
CLDND2Q8NHS1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.58■□□□□ 0.09
CLDND2Q8NHS1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.58■□□□□ 0.09
CLDND2Q8NHS1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLDND2Q8NHS1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLDND2Q8NHS1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.58■□□□□ 0.09
CLDND2Q8NHS1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 FEM1AP3-201ENST00000403722 1741 ntBASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDND2Q8NHS1 AL645929.1-201ENST00000420084 975 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms