Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 ELL2P1-201ENST00000413990 1906 ntBASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 AC136632.2-201ENST00000512891 861 ntBASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC168Q8NDH2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 MTDHP4-201ENST00000600287 670 ntBASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 AL357033.4-201ENST00000617703 1807 ntBASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 AC015922.1-201ENST00000421102 1152 ntBASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 AC113404.2-201ENST00000507884 177 ntBASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC168Q8NDH2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 Z92544.3-201ENST00000624747 417 ntBASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC168Q8NDH2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms