Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 KRT18P23-201ENST00000435622 1283 ntBASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 MIR3180-4-201ENST00000582223 153 ntBASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LSMEM1Q8N8F7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 SDHAP2-201ENST00000455183 2001 ntBASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 AC009102.3-201ENST00000623118 1491 ntBASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 AC124067.4-201ENST00000519691 2379 ntBASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 AC046158.3-201ENST00000624947 2558 ntBASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LSMEM1Q8N8F7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 AC128688.1-201ENST00000487626 519 ntBASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 AC009065.1-201ENST00000564055 1225 ntBASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSMEM1Q8N8F7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms