Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 PCED1CP-201ENST00000419887 785 ntBASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 HLA-F-220ENST00000434407 884 ntBASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 VENTXP5-201ENST00000523979 775 ntBASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 AC079602.3-201ENST00000623931 403 ntBASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 AP000550.4-202ENST00000639755 178 ntBASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 AC005332.8-201ENST00000622750 2735 ntBASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 AC005332.1-201ENST00000577698 1310 ntBASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 AL391807.1-203ENST00000604392 2365 ntBASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 PVRIG2P-201ENST00000435460 978 ntBASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 AC009113.1-201ENST00000570267 2443 ntBASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDH20Q8N6Y1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 AC093525.10-201ENST00000625130 1569 ntBASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 SPDYE13P-201ENST00000445314 798 ntBASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH20Q8N6Y1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 IER3-202ENST00000376377 1350 ntBASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 AL163051.1-201ENST00000569214 1512 ntBASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH20Q8N6Y1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms