Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 AC113404.2-201ENST00000507884 177 ntBASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 AC091076.1-201ENST00000610741 619 ntBASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 AL358472.4-201ENST00000633140 710 ntBASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRAM1L1Q8N609 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 IGHGP-201ENST00000390555 1178 ntBASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAM1L1Q8N609 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAM1L1Q8N609 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
TRAM1L1Q8N609 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAM1L1Q8N609 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TRAM1L1Q8N609 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.08■□□□□ 0.49
TRAM1L1Q8N609 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAM1L1Q8N609 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRAM1L1Q8N609 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAM1L1Q8N609 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAM1L1Q8N609 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.08■□□□□ 0.49
TRAM1L1Q8N609 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 RNF126P1-202ENST00000569893 925 ntBASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 AC005332.3-201ENST00000589904 676 ntBASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 AC011498.5-201ENST00000592027 486 ntBASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 GPR32P1-201ENST00000601788 811 ntBASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms