Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39CQ8N584 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39CQ8N584 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39CQ8N584 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
TTC39CQ8N584 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TTC39CQ8N584 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TTC39CQ8N584 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.48■□□□□ 0.71
TTC39CQ8N584 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39CQ8N584 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TTC39CQ8N584 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39CQ8N584 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TTC39CQ8N584 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39CQ8N584 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39CQ8N584 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39CQ8N584 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.47■□□□□ 0.71
TTC39CQ8N584 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.47■□□□□ 0.71
TTC39CQ8N584 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
TTC39CQ8N584 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.47■□□□□ 0.71
TTC39CQ8N584 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.47■□□□□ 0.71
TTC39CQ8N584 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.47■□□□□ 0.71
TTC39CQ8N584 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.47■□□□□ 0.71
TTC39CQ8N584 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39CQ8N584 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39CQ8N584 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
TTC39CQ8N584 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39CQ8N584 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39CQ8N584 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TTC39CQ8N584 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.46■□□□□ 0.71
TTC39CQ8N584 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
TTC39CQ8N584 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.46■□□□□ 0.71
TTC39CQ8N584 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.46■□□□□ 0.71
TTC39CQ8N584 AL136038.3-201ENST00000561909 1096 ntBASIC19.46■□□□□ 0.71
TTC39CQ8N584 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.46■□□□□ 0.71
TTC39CQ8N584 NTF6B-201ENST00000591913 560 ntBASIC19.46■□□□□ 0.71
TTC39CQ8N584 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
TTC39CQ8N584 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.46■□□□□ 0.71
TTC39CQ8N584 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TTC39CQ8N584 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TTC39CQ8N584 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TTC39CQ8N584 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC39CQ8N584 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39CQ8N584 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39CQ8N584 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39CQ8N584 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TTC39CQ8N584 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39CQ8N584 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.45■□□□□ 0.7
TTC39CQ8N584 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39CQ8N584 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39CQ8N584 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39CQ8N584 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39CQ8N584 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39CQ8N584 LINC01126-201ENST00000623515 1646 ntBASIC19.45■□□□□ 0.7
TTC39CQ8N584 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39CQ8N584 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39CQ8N584 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39CQ8N584 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.45■□□□□ 0.7
TTC39CQ8N584 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.45■□□□□ 0.7
TTC39CQ8N584 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.45■□□□□ 0.7
TTC39CQ8N584 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.45■□□□□ 0.7
TTC39CQ8N584 AC083849.1-201ENST00000615227 514 ntBASIC19.45■□□□□ 0.7
TTC39CQ8N584 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.45■□□□□ 0.7
TTC39CQ8N584 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.45■□□□□ 0.7
TTC39CQ8N584 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
TTC39CQ8N584 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TTC39CQ8N584 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39CQ8N584 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39CQ8N584 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.45■□□□□ 0.7
TTC39CQ8N584 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39CQ8N584 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.45■□□□□ 0.7
TTC39CQ8N584 AC093677.2-201ENST00000600169 1863 ntBASIC19.45■□□□□ 0.7
TTC39CQ8N584 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.45■□□□□ 0.7
TTC39CQ8N584 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.45■□□□□ 0.7
TTC39CQ8N584 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39CQ8N584 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TTC39CQ8N584 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.45■□□□□ 0.7
TTC39CQ8N584 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39CQ8N584 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39CQ8N584 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.44■□□□□ 0.7
TTC39CQ8N584 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39CQ8N584 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TTC39CQ8N584 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms