Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST3H2BBQ8N257 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 AC137630.3-201ENST00000607245 391 ntBASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 AC008175.2-201ENST00000612840 297 ntBASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 SYT6-210ENST00000641643 1587 ntBASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HIST3H2BBQ8N257 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 AC104417.2-201ENST00000562989 1793 ntBASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 AC092068.3-201ENST00000587894 2016 ntBASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 AL117332.1-201ENST00000622628 974 ntBASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 AC005224.4-201ENST00000583262 1652 ntBASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST3H2BBQ8N257 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms