Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 ESPNP-201ENST00000270691 2015 ntBASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 AC112698.1-201ENST00000510299 916 ntBASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC25.32■■□□□ 1.64
ARHGEF28Q8N1W1 AC093010.1-201ENST00000473625 1624 ntBASIC25.31■■□□□ 1.64
ARHGEF28Q8N1W1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC25.31■■□□□ 1.64
ARHGEF28Q8N1W1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC25.31■■□□□ 1.64
ARHGEF28Q8N1W1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC25.31■■□□□ 1.64
ARHGEF28Q8N1W1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC25.31■■□□□ 1.64
ARHGEF28Q8N1W1 LINC00602-201ENST00000629776 2065 ntBASIC25.31■■□□□ 1.64
ARHGEF28Q8N1W1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
ARHGEF28Q8N1W1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
ARHGEF28Q8N1W1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
ARHGEF28Q8N1W1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ARHGEF28Q8N1W1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ARHGEF28Q8N1W1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC25.31■■□□□ 1.64
ARHGEF28Q8N1W1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC25.31■■□□□ 1.64
ARHGEF28Q8N1W1 AL049840.3-201ENST00000602669 611 ntBASIC25.31■■□□□ 1.64
ARHGEF28Q8N1W1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ARHGEF28Q8N1W1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ARHGEF28Q8N1W1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
ARHGEF28Q8N1W1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ARHGEF28Q8N1W1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
ARHGEF28Q8N1W1 AL031284.1-201ENST00000419297 478 ntBASIC25.3■■□□□ 1.64
ARHGEF28Q8N1W1 AC079776.4-201ENST00000511039 504 ntBASIC25.3■■□□□ 1.64
ARHGEF28Q8N1W1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC25.3■■□□□ 1.64
ARHGEF28Q8N1W1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
ARHGEF28Q8N1W1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ARHGEF28Q8N1W1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC25.3■■□□□ 1.64
ARHGEF28Q8N1W1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ARHGEF28Q8N1W1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC25.29■■□□□ 1.64
ARHGEF28Q8N1W1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ARHGEF28Q8N1W1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ARHGEF28Q8N1W1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC25.29■■□□□ 1.64
ARHGEF28Q8N1W1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC25.29■■□□□ 1.64
ARHGEF28Q8N1W1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC25.29■■□□□ 1.64
ARHGEF28Q8N1W1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ARHGEF28Q8N1W1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC25.29■■□□□ 1.64
ARHGEF28Q8N1W1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC25.29■■□□□ 1.64
ARHGEF28Q8N1W1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC25.29■■□□□ 1.64
ARHGEF28Q8N1W1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC25.29■■□□□ 1.64
ARHGEF28Q8N1W1 MIR5100-201ENST00000579544 119 ntBASIC25.29■■□□□ 1.64
ARHGEF28Q8N1W1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC25.29■■□□□ 1.64
ARHGEF28Q8N1W1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC25.29■■□□□ 1.64
ARHGEF28Q8N1W1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ARHGEF28Q8N1W1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ARHGEF28Q8N1W1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC25.29■■□□□ 1.64
ARHGEF28Q8N1W1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 AC009533.2-201ENST00000543664 586 ntBASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 SART3-203ENST00000546611 1184 ntBASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ARHGEF28Q8N1W1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 CROCCP3-202ENST00000420820 1947 ntBASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms