Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 AC011498.5-201ENST00000592027 486 ntBASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf40Q8IXQ3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
C9orf40Q8IXQ3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.89■□□□□ 0.3
C9orf40Q8IXQ3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 IGHGP-201ENST00000390555 1178 ntBASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 AC005332.3-201ENST00000589904 676 ntBASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
C9orf40Q8IXQ3 Z83836.1-201ENST00000624605 1642 ntBASIC16.88■□□□□ 0.29
C9orf40Q8IXQ3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.88■□□□□ 0.29
C9orf40Q8IXQ3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.88■□□□□ 0.29
C9orf40Q8IXQ3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf40Q8IXQ3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
C9orf40Q8IXQ3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
C9orf40Q8IXQ3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf40Q8IXQ3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf40Q8IXQ3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf40Q8IXQ3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf40Q8IXQ3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms