Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.27■□□□□ 0.03
ZNF546Q86UE3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF546Q86UE3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
ZNF546Q86UE3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF546Q86UE3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF546Q86UE3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF546Q86UE3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.27■□□□□ 0.03
ZNF546Q86UE3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF546Q86UE3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
ZNF546Q86UE3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.27■□□□□ 0.03
ZNF546Q86UE3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.03
ZNF546Q86UE3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
ZNF546Q86UE3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 KRT8P8-201ENST00000434750 1448 ntBASIC15.26■□□□□ 0.03
ZNF546Q86UE3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 AC069236.1-201ENST00000604339 616 ntBASIC15.26■□□□□ 0.03
ZNF546Q86UE3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZNF546Q86UE3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 PCDHB19P-201ENST00000570871 2371 ntBASIC15.25■□□□□ 0.03
ZNF546Q86UE3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF546Q86UE3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF546Q86UE3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms