Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 PDPK2P-202ENST00000562415 1191 ntBASIC15.41■□□□□ 0.06
CSMD2Q7Z408 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 AL078644.1-201ENST00000609881 752 ntBASIC15.41■□□□□ 0.06
CSMD2Q7Z408 AL139288.1-201ENST00000623748 933 ntBASIC15.41■□□□□ 0.06
CSMD2Q7Z408 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 AC125634.1-201ENST00000438758 1403 ntBASIC15.41■□□□□ 0.06
CSMD2Q7Z408 AC007952.6-201ENST00000573168 2673 ntBASIC15.41■□□□□ 0.06
CSMD2Q7Z408 AC003957.1-201ENST00000625108 2673 ntBASIC15.41■□□□□ 0.06
CSMD2Q7Z408 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 AC005498.2-205ENST00000593218 784 ntBASIC15.41■□□□□ 0.06
CSMD2Q7Z408 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSMD2Q7Z408 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 AFG3L1P-217ENST00000557444 2447 ntBASIC15.4■□□□□ 0.06
CSMD2Q7Z408 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CSMD2Q7Z408 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 AP000867.4-201ENST00000641616 219 ntBASIC15.39■□□□□ 0.05
CSMD2Q7Z408 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSMD2Q7Z408 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSMD2Q7Z408 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CSMD2Q7Z408 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CSMD2Q7Z408 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CSMD2Q7Z408 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.38■□□□□ 0.05
CSMD2Q7Z408 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.38■□□□□ 0.05
CSMD2Q7Z408 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.38■□□□□ 0.05
CSMD2Q7Z408 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms