Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC12.73□□□□□ -0.37
CSMD3Q7Z407 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 AL049812.1-201ENST00000432563 2267 ntBASIC12.72□□□□□ -0.37
CSMD3Q7Z407 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 AC007952.6-201ENST00000573168 2673 ntBASIC12.72□□□□□ -0.37
CSMD3Q7Z407 AC003957.1-201ENST00000625108 2673 ntBASIC12.72□□□□□ -0.37
CSMD3Q7Z407 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 AC113404.2-201ENST00000507884 177 ntBASIC12.72□□□□□ -0.37
CSMD3Q7Z407 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 AL356309.3-201ENST00000624132 1934 ntBASIC12.72□□□□□ -0.37
CSMD3Q7Z407 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 AC083906.6-201ENST00000641366 219 ntBASIC12.72□□□□□ -0.37
CSMD3Q7Z407 AC079781.4-201ENST00000641908 219 ntBASIC12.72□□□□□ -0.37
CSMD3Q7Z407 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CSMD3Q7Z407 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 AC007967.2-201ENST00000432613 625 ntBASIC12.71□□□□□ -0.37
CSMD3Q7Z407 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CSMD3Q7Z407 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CSMD3Q7Z407 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CSMD3Q7Z407 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC12.71□□□□□ -0.38
CSMD3Q7Z407 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CSMD3Q7Z407 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CSMD3Q7Z407 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.71□□□□□ -0.38
CSMD3Q7Z407 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC12.71□□□□□ -0.38
CSMD3Q7Z407 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CSMD3Q7Z407 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
CSMD3Q7Z407 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CSMD3Q7Z407 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.71□□□□□ -0.38
CSMD3Q7Z407 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.71□□□□□ -0.38
CSMD3Q7Z407 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.71□□□□□ -0.38
CSMD3Q7Z407 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.71□□□□□ -0.38
CSMD3Q7Z407 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD3Q7Z407 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD3Q7Z407 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC12.7□□□□□ -0.38
CSMD3Q7Z407 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CSMD3Q7Z407 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD3Q7Z407 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD3Q7Z407 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.7□□□□□ -0.38
CSMD3Q7Z407 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD3Q7Z407 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CSMD3Q7Z407 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.7□□□□□ -0.38
CSMD3Q7Z407 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.7□□□□□ -0.38
CSMD3Q7Z407 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.7□□□□□ -0.38
CSMD3Q7Z407 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.7□□□□□ -0.38
CSMD3Q7Z407 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.7□□□□□ -0.38
CSMD3Q7Z407 MIR4469-201ENST00000583919 79 ntBASIC12.7□□□□□ -0.38
CSMD3Q7Z407 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms