Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL163051.1-201ENST00000569214 1512 ntBASIC15.24■□□□□ 0.03
VPS13CQ709C8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VPS13CQ709C8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS13CQ709C8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.24■□□□□ 0.03
VPS13CQ709C8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.24■□□□□ 0.03
VPS13CQ709C8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.24■□□□□ 0.03
VPS13CQ709C8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS13CQ709C8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VPS13CQ709C8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VPS13CQ709C8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.24■□□□□ 0.03
VPS13CQ709C8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.24■□□□□ 0.03
VPS13CQ709C8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
VPS13CQ709C8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS13CQ709C8 KRT89P-201ENST00000620027 1478 ntBASIC15.24■□□□□ 0.03
VPS13CQ709C8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.24■□□□□ 0.03
VPS13CQ709C8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.24■□□□□ 0.03
VPS13CQ709C8 ALG1L5P-201ENST00000482043 771 ntBASIC15.24■□□□□ 0.03
VPS13CQ709C8 KRT18P41-201ENST00000518924 1277 ntBASIC15.24■□□□□ 0.03
VPS13CQ709C8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.24■□□□□ 0.03
VPS13CQ709C8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.24■□□□□ 0.03
VPS13CQ709C8 SPCS2P1-201ENST00000561636 679 ntBASIC15.24■□□□□ 0.03
VPS13CQ709C8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
VPS13CQ709C8 AL356488.2-201ENST00000602755 427 ntBASIC15.24■□□□□ 0.03
VPS13CQ709C8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS13CQ709C8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VPS13CQ709C8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.24■□□□□ 0.03
VPS13CQ709C8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VPS13CQ709C8 UNC93B6-202ENST00000528242 690 ntBASIC15.23■□□□□ 0.03
VPS13CQ709C8 AC009533.2-201ENST00000543664 586 ntBASIC15.23■□□□□ 0.03
VPS13CQ709C8 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.23■□□□□ 0.03
VPS13CQ709C8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.23■□□□□ 0.03
VPS13CQ709C8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS13CQ709C8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS13CQ709C8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS13CQ709C8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS13CQ709C8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS13CQ709C8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VPS13CQ709C8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS13CQ709C8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
VPS13CQ709C8 NUS1P2-201ENST00000417358 873 ntBASIC15.23■□□□□ 0.03
VPS13CQ709C8 RNA5SP415-201ENST00000517246 115 ntBASIC15.23■□□□□ 0.03
VPS13CQ709C8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.23■□□□□ 0.03
VPS13CQ709C8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.23■□□□□ 0.03
VPS13CQ709C8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS13CQ709C8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS13CQ709C8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS13CQ709C8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VPS13CQ709C8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.23■□□□□ 0.03
VPS13CQ709C8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.23■□□□□ 0.03
VPS13CQ709C8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS13CQ709C8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS13CQ709C8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS13CQ709C8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.23■□□□□ 0.03
VPS13CQ709C8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.23■□□□□ 0.03
VPS13CQ709C8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.23■□□□□ 0.03
VPS13CQ709C8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
VPS13CQ709C8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VPS13CQ709C8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
VPS13CQ709C8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.22■□□□□ 0.03
VPS13CQ709C8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.22■□□□□ 0.03
VPS13CQ709C8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS13CQ709C8 RPS8P6-201ENST00000426177 609 ntBASIC15.22■□□□□ 0.03
VPS13CQ709C8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.22■□□□□ 0.03
VPS13CQ709C8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.22■□□□□ 0.03
VPS13CQ709C8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VPS13CQ709C8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.22■□□□□ 0.03
VPS13CQ709C8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VPS13CQ709C8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
VPS13CQ709C8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VPS13CQ709C8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS13CQ709C8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.22■□□□□ 0.03
VPS13CQ709C8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VPS13CQ709C8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.22■□□□□ 0.03
VPS13CQ709C8 RCN1P2-201ENST00000398357 915 ntBASIC15.22■□□□□ 0.03
VPS13CQ709C8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
VPS13CQ709C8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.22■□□□□ 0.03
VPS13CQ709C8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS13CQ709C8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS13CQ709C8 Z98044.1-201ENST00000632503 1764 ntBASIC15.22■□□□□ 0.03
VPS13CQ709C8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS13CQ709C8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS13CQ709C8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS13CQ709C8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VPS13CQ709C8 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.22■□□□□ 0.03
VPS13CQ709C8 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.22■□□□□ 0.03
VPS13CQ709C8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.22■□□□□ 0.03
VPS13CQ709C8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.22■□□□□ 0.03
VPS13CQ709C8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.21■□□□□ 0.03
VPS13CQ709C8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.21■□□□□ 0.03
VPS13CQ709C8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS13CQ709C8 SDHAP2-201ENST00000455183 2001 ntBASIC15.21■□□□□ 0.03
VPS13CQ709C8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.21■□□□□ 0.03
VPS13CQ709C8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS13CQ709C8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VPS13CQ709C8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS13CQ709C8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VPS13CQ709C8 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.21■□□□□ 0.03
VPS13CQ709C8 AC004832.2-201ENST00000426397 482 ntBASIC15.21■□□□□ 0.03
VPS13CQ709C8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.21■□□□□ 0.03
VPS13CQ709C8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms