Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 AC104581.1-202ENST00000635932 2618 ntBASIC17.21■□□□□ 0.35
RTL4Q6ZR62 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL4Q6ZR62 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RTL4Q6ZR62 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RTL4Q6ZR62 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RTL4Q6ZR62 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
RTL4Q6ZR62 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RTL4Q6ZR62 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RTL4Q6ZR62 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 AC020916.1-201ENST00000587762 1774 ntBASIC17.2■□□□□ 0.34
RTL4Q6ZR62 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 AC009113.1-201ENST00000570267 2443 ntBASIC17.2■□□□□ 0.34
RTL4Q6ZR62 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 AC090164.3-201ENST00000610780 2143 ntBASIC17.2■□□□□ 0.34
RTL4Q6ZR62 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTL4Q6ZR62 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 KRT8P32-201ENST00000512863 1461 ntBASIC17.19■□□□□ 0.34
RTL4Q6ZR62 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.19■□□□□ 0.34
RTL4Q6ZR62 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 AC083906.6-201ENST00000641366 219 ntBASIC17.19■□□□□ 0.34
RTL4Q6ZR62 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTL4Q6ZR62 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RTL4Q6ZR62 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms