Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNI2Q6ZMN8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNI2Q6ZMN8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNI2Q6ZMN8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.46■□□□□ 0.71
CCNI2Q6ZMN8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNI2Q6ZMN8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNI2Q6ZMN8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNI2Q6ZMN8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.46■□□□□ 0.71
CCNI2Q6ZMN8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CCNI2Q6ZMN8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 AC108860.2-201ENST00000562760 2183 ntBASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 TSPY21P-201ENST00000433481 731 ntBASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 KRT16P5-201ENST00000455284 522 ntBASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 MTMR9LP-203ENST00000426597 1545 ntBASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNI2Q6ZMN8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 UNC93B2-201ENST00000285383 730 ntBASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 AL137013.1-201ENST00000432946 1228 ntBASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
CCNI2Q6ZMN8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 AC073508.3-201ENST00000619697 1419 ntBASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 TERF1P1-201ENST00000311003 1181 ntBASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 KRT18P16-201ENST00000510337 1294 ntBASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 AC073195.1-201ENST00000607241 877 ntBASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 AP000525.1-201ENST00000608286 694 ntBASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 AC090340.1-201ENST00000620778 4980 ntBASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNI2Q6ZMN8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms