Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PACS1Q6VY07 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
PACS1Q6VY07 AC007663.1-201ENST00000438948 1240 ntBASIC18.55■□□□□ 0.56
PACS1Q6VY07 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.55■□□□□ 0.56
PACS1Q6VY07 AP003041.3-201ENST00000527151 707 ntBASIC18.55■□□□□ 0.56
PACS1Q6VY07 MIR4674-201ENST00000582457 87 ntBASIC18.55■□□□□ 0.56
PACS1Q6VY07 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
PACS1Q6VY07 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PACS1Q6VY07 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PACS1Q6VY07 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PACS1Q6VY07 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PACS1Q6VY07 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.55■□□□□ 0.56
PACS1Q6VY07 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PACS1Q6VY07 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PACS1Q6VY07 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PACS1Q6VY07 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PACS1Q6VY07 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
PACS1Q6VY07 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.55■□□□□ 0.56
PACS1Q6VY07 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PACS1Q6VY07 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.54■□□□□ 0.56
PACS1Q6VY07 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.54■□□□□ 0.56
PACS1Q6VY07 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PACS1Q6VY07 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PACS1Q6VY07 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PACS1Q6VY07 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PACS1Q6VY07 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PACS1Q6VY07 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PACS1Q6VY07 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.54■□□□□ 0.56
PACS1Q6VY07 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PACS1Q6VY07 AC128688.1-201ENST00000487626 519 ntBASIC18.54■□□□□ 0.56
PACS1Q6VY07 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.54■□□□□ 0.56
PACS1Q6VY07 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.54■□□□□ 0.56
PACS1Q6VY07 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.54■□□□□ 0.56
PACS1Q6VY07 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PACS1Q6VY07 AP000997.3-201ENST00000623333 2250 ntBASIC18.54■□□□□ 0.56
PACS1Q6VY07 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PACS1Q6VY07 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PACS1Q6VY07 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PACS1Q6VY07 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PACS1Q6VY07 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PACS1Q6VY07 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PACS1Q6VY07 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PACS1Q6VY07 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PACS1Q6VY07 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.54■□□□□ 0.56
PACS1Q6VY07 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.53■□□□□ 0.56
PACS1Q6VY07 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PACS1Q6VY07 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PACS1Q6VY07 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
PACS1Q6VY07 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PACS1Q6VY07 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PACS1Q6VY07 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
PACS1Q6VY07 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.53■□□□□ 0.56
PACS1Q6VY07 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PACS1Q6VY07 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PACS1Q6VY07 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.53■□□□□ 0.56
PACS1Q6VY07 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PACS1Q6VY07 REXO1L9P-201ENST00000604264 2108 ntBASIC18.53■□□□□ 0.56
PACS1Q6VY07 AC138028.4-201ENST00000564984 1845 ntBASIC18.53■□□□□ 0.56
PACS1Q6VY07 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.53■□□□□ 0.56
PACS1Q6VY07 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.53■□□□□ 0.56
PACS1Q6VY07 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PACS1Q6VY07 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.53■□□□□ 0.56
PACS1Q6VY07 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PACS1Q6VY07 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PACS1Q6VY07 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PACS1Q6VY07 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PACS1Q6VY07 FZD10-202ENST00000539839 3282 ntBASIC18.52■□□□□ 0.56
PACS1Q6VY07 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PACS1Q6VY07 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.52■□□□□ 0.56
PACS1Q6VY07 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PACS1Q6VY07 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PACS1Q6VY07 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.52■□□□□ 0.56
PACS1Q6VY07 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.52■□□□□ 0.56
PACS1Q6VY07 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.52■□□□□ 0.56
PACS1Q6VY07 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PACS1Q6VY07 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.52■□□□□ 0.56
PACS1Q6VY07 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PACS1Q6VY07 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PACS1Q6VY07 MIR564-202ENST00000385049 94 ntBASIC18.52■□□□□ 0.56
PACS1Q6VY07 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PACS1Q6VY07 AC087499.1-201ENST00000418141 1075 ntBASIC18.52■□□□□ 0.56
PACS1Q6VY07 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.52■□□□□ 0.56
PACS1Q6VY07 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.52■□□□□ 0.56
PACS1Q6VY07 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.52■□□□□ 0.56
PACS1Q6VY07 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.52■□□□□ 0.56
PACS1Q6VY07 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PACS1Q6VY07 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PACS1Q6VY07 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PACS1Q6VY07 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PACS1Q6VY07 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PACS1Q6VY07 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PACS1Q6VY07 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PACS1Q6VY07 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PACS1Q6VY07 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.52■□□□□ 0.55
PACS1Q6VY07 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PACS1Q6VY07 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PACS1Q6VY07 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PACS1Q6VY07 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PACS1Q6VY07 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.51■□□□□ 0.55
PACS1Q6VY07 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms