Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 AC009102.3-201ENST00000623118 1491 ntBASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 MIR149-201ENST00000384879 89 ntBASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 AC128688.1-201ENST00000487626 519 ntBASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 AC104390.1-201ENST00000555663 520 ntBASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 AC112497.1-201ENST00000624824 639 ntBASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 GMCL1P1-201ENST00000463439 1581 ntBASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 REXO1L9P-201ENST00000604264 2108 ntBASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 PHGDH-209ENST00000641074 1780 ntBASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF549Q6P9A3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
ZNF549Q6P9A3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 AC068880.1-201ENST00000507289 2297 ntBASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 BCL2-203ENST00000589955 5011 ntBASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 AC009947.2-201ENST00000444014 672 ntBASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.2■□□□□ 0.5
ZNF549Q6P9A3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF549Q6P9A3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.19■□□□□ 0.5
ZNF549Q6P9A3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.19■□□□□ 0.5
ZNF549Q6P9A3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF549Q6P9A3 LINC01568-207ENST00000641790 1380 ntBASIC18.19■□□□□ 0.5
ZNF549Q6P9A3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms