Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 CLDN5-201ENST00000403084 2357 ntBASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 AP006288.1-201ENST00000446065 395 ntBASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 NKAPP1-205ENST00000585790 367 ntBASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
VPS13DQ5THJ4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 AC093484.2-201ENST00000580996 2166 ntBASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 AC009102.3-201ENST00000623118 1491 ntBASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 BID-204ENST00000399767 2129 ntTSL 2 BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 AC112482.1-201ENST00000492080 688 ntBASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 AC112698.1-201ENST00000510299 916 ntBASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 ZNF259P1-201ENST00000407656 1365 ntBASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 KRT8P47-201ENST00000604727 1398 ntBASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 SIGLEC16-201ENST00000599858 1437 ntBASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 AC073621.1-201ENST00000392730 636 ntBASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 YBX2P1-201ENST00000394192 760 ntBASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.29□□□□□ -0.44
VPS13DQ5THJ4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 ALG1L5P-201ENST00000482043 771 ntBASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 RFPL4AP1-201ENST00000530883 850 ntBASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
VPS13DQ5THJ4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
VPS13DQ5THJ4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
VPS13DQ5THJ4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC12.27□□□□□ -0.44
VPS13DQ5THJ4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VPS13DQ5THJ4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms