Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 AC138028.4-201ENST00000564984 1845 ntBASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 AC009102.3-201ENST00000623118 1491 ntBASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP13A4Q4VNC1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 MIR149-201ENST00000384879 89 ntBASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 AC112497.1-201ENST00000624824 639 ntBASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP13A4Q4VNC1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 KRT8P7-201ENST00000533003 1432 ntBASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 AC104390.1-201ENST00000555663 520 ntBASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ATP13A4Q4VNC1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP13A4Q4VNC1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP13A4Q4VNC1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP13A4Q4VNC1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ATP13A4Q4VNC1 FZD10-202ENST00000539839 3282 ntBASIC19.1■□□□□ 0.65
ATP13A4Q4VNC1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
ATP13A4Q4VNC1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP13A4Q4VNC1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ATP13A4Q4VNC1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP13A4Q4VNC1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP13A4Q4VNC1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ATP13A4Q4VNC1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP13A4Q4VNC1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP13A4Q4VNC1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP13A4Q4VNC1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms