Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 GUSBP12-201ENST00000513727 720 ntBASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 AL138781.2-201ENST00000617896 1843 ntBASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 NUS1P2-201ENST00000417358 873 ntBASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 AC091607.1-201ENST00000490318 1060 ntBASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.59■□□□□ 0.73
CTC1Q2NKJ3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTC1Q2NKJ3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTC1Q2NKJ3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CTC1Q2NKJ3 AC007613.1-201ENST00000572811 2597 ntBASIC19.58■□□□□ 0.73
CTC1Q2NKJ3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.58■□□□□ 0.73
CTC1Q2NKJ3 PMS2P7-201ENST00000506558 1336 ntBASIC19.58■□□□□ 0.73
CTC1Q2NKJ3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTC1Q2NKJ3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 POM121L3P-201ENST00000419331 1163 ntBASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 VENTXP7-201ENST00000475503 772 ntBASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 POLD2P1-201ENST00000511220 997 ntBASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 AC009065.1-201ENST00000564055 1225 ntBASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 AC148477.8-201ENST00000624298 468 ntBASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CTC1Q2NKJ3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 MIR3180-4-201ENST00000582223 153 ntBASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTC1Q2NKJ3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms