Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.46■□□□□ 0.71
DSC1Q08554 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.46■□□□□ 0.71
DSC1Q08554 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
DSC1Q08554 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.46■□□□□ 0.71
DSC1Q08554 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
DSC1Q08554 AL662844.1-201ENST00000546340 181 ntBASIC19.46■□□□□ 0.71
DSC1Q08554 AL591684.3-201ENST00000605187 298 ntBASIC19.46■□□□□ 0.71
DSC1Q08554 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DSC1Q08554 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.46■□□□□ 0.71
DSC1Q08554 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.46■□□□□ 0.71
DSC1Q08554 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.46■□□□□ 0.71
DSC1Q08554 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DSC1Q08554 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DSC1Q08554 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.46■□□□□ 0.71
DSC1Q08554 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DSC1Q08554 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.46■□□□□ 0.71
DSC1Q08554 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.46■□□□□ 0.71
DSC1Q08554 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
DSC1Q08554 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
DSC1Q08554 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.45■□□□□ 0.7
DSC1Q08554 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DSC1Q08554 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DSC1Q08554 AC005082.1-201ENST00000413042 2259 ntBASIC19.45■□□□□ 0.7
DSC1Q08554 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.45■□□□□ 0.7
DSC1Q08554 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DSC1Q08554 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DSC1Q08554 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
DSC1Q08554 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DSC1Q08554 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DSC1Q08554 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
DSC1Q08554 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.45■□□□□ 0.7
DSC1Q08554 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.45■□□□□ 0.7
DSC1Q08554 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
DSC1Q08554 AL138831.2-201ENST00000606564 490 ntBASIC19.45■□□□□ 0.7
DSC1Q08554 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DSC1Q08554 TP73-AS1-207ENST00000624167 988 ntBASIC19.45■□□□□ 0.7
DSC1Q08554 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
DSC1Q08554 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
DSC1Q08554 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DSC1Q08554 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
DSC1Q08554 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
DSC1Q08554 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
DSC1Q08554 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
DSC1Q08554 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
DSC1Q08554 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DSC1Q08554 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DSC1Q08554 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DSC1Q08554 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DSC1Q08554 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DSC1Q08554 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DSC1Q08554 TP73-AS1-210ENST00000637775 1455 ntBASIC19.44■□□□□ 0.7
DSC1Q08554 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DSC1Q08554 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DSC1Q08554 RCN1P2-201ENST00000398357 915 ntBASIC19.44■□□□□ 0.7
DSC1Q08554 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DSC1Q08554 KRT18P65-201ENST00000439811 1286 ntBASIC19.44■□□□□ 0.7
DSC1Q08554 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.44■□□□□ 0.7
DSC1Q08554 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
DSC1Q08554 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.44■□□□□ 0.7
DSC1Q08554 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.44■□□□□ 0.7
DSC1Q08554 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.44■□□□□ 0.7
DSC1Q08554 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
DSC1Q08554 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DSC1Q08554 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DSC1Q08554 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DSC1Q08554 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.44■□□□□ 0.7
DSC1Q08554 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DSC1Q08554 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DSC1Q08554 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.43■□□□□ 0.7
DSC1Q08554 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DSC1Q08554 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DSC1Q08554 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DSC1Q08554 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DSC1Q08554 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DSC1Q08554 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DSC1Q08554 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.43■□□□□ 0.7
DSC1Q08554 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DSC1Q08554 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.43■□□□□ 0.7
DSC1Q08554 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DSC1Q08554 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
DSC1Q08554 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.43■□□□□ 0.7
DSC1Q08554 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.43■□□□□ 0.7
DSC1Q08554 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.43■□□□□ 0.7
DSC1Q08554 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.43■□□□□ 0.7
DSC1Q08554 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.43■□□□□ 0.7
DSC1Q08554 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.43■□□□□ 0.7
DSC1Q08554 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.43■□□□□ 0.7
DSC1Q08554 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.43■□□□□ 0.7
DSC1Q08554 HLA-A-201ENST00000376802 1334 ntBASIC19.43■□□□□ 0.7
DSC1Q08554 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.43■□□□□ 0.7
DSC1Q08554 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DSC1Q08554 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.43■□□□□ 0.7
DSC1Q08554 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.42■□□□□ 0.7
DSC1Q08554 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
DSC1Q08554 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
DSC1Q08554 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
DSC1Q08554 AL031598.1-201ENST00000561511 1773 ntBASIC19.42■□□□□ 0.7
DSC1Q08554 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DSC1Q08554 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.42■□□□□ 0.7
DSC1Q08554 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms