Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRA2BP62995 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRA2BP62995 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRA2BP62995 PVRIG2P-201ENST00000435460 978 ntBASIC17.31■□□□□ 0.36
TRA2BP62995 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRA2BP62995 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRA2BP62995 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TRA2BP62995 AC034232.1-201ENST00000506026 1064 ntBASIC17.31■□□□□ 0.36
TRA2BP62995 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.31■□□□□ 0.36
TRA2BP62995 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
TRA2BP62995 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRA2BP62995 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRA2BP62995 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.31■□□□□ 0.36
TRA2BP62995 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.31■□□□□ 0.36
TRA2BP62995 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRA2BP62995 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRA2BP62995 AC093010.1-201ENST00000473625 1624 ntBASIC17.31■□□□□ 0.36
TRA2BP62995 LINC01126-201ENST00000623515 1646 ntBASIC17.31■□□□□ 0.36
TRA2BP62995 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRA2BP62995 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRA2BP62995 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRA2BP62995 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRA2BP62995 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRA2BP62995 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRA2BP62995 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRA2BP62995 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRA2BP62995 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRA2BP62995 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.3■□□□□ 0.36
TRA2BP62995 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.3■□□□□ 0.36
TRA2BP62995 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRA2BP62995 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.3■□□□□ 0.36
TRA2BP62995 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.3■□□□□ 0.36
TRA2BP62995 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRA2BP62995 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 AC113347.1-201ENST00000413321 391 ntBASIC17.3■□□□□ 0.36
TRA2BP62995 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 ATP5G1P1-201ENST00000448724 379 ntBASIC17.3■□□□□ 0.36
TRA2BP62995 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.3■□□□□ 0.36
TRA2BP62995 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRA2BP62995 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRA2BP62995 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TRA2BP62995 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.3■□□□□ 0.36
TRA2BP62995 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRA2BP62995 AC005363.2-201ENST00000618631 242 ntBASIC17.3■□□□□ 0.36
TRA2BP62995 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.3■□□□□ 0.36
TRA2BP62995 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.3■□□□□ 0.36
TRA2BP62995 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.3■□□□□ 0.36
TRA2BP62995 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.3■□□□□ 0.36
TRA2BP62995 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.3■□□□□ 0.36
TRA2BP62995 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRA2BP62995 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRA2BP62995 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.29■□□□□ 0.36
TRA2BP62995 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRA2BP62995 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRA2BP62995 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRA2BP62995 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
TRA2BP62995 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRA2BP62995 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRA2BP62995 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.29■□□□□ 0.36
TRA2BP62995 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.29■□□□□ 0.36
TRA2BP62995 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.29■□□□□ 0.36
TRA2BP62995 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRA2BP62995 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.29■□□□□ 0.36
TRA2BP62995 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRA2BP62995 AC140113.3-201ENST00000605663 199 ntBASIC17.29■□□□□ 0.36
TRA2BP62995 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRA2BP62995 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRA2BP62995 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRA2BP62995 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.29■□□□□ 0.36
TRA2BP62995 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRA2BP62995 REXO1L9P-201ENST00000604264 2108 ntBASIC17.29■□□□□ 0.36
TRA2BP62995 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRA2BP62995 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRA2BP62995 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRA2BP62995 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRA2BP62995 HCG11-201ENST00000411553 5696 ntBASIC17.28■□□□□ 0.36
TRA2BP62995 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRA2BP62995 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.28■□□□□ 0.36
TRA2BP62995 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRA2BP62995 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.28■□□□□ 0.36
TRA2BP62995 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
TRA2BP62995 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRA2BP62995 NOC2LP2-201ENST00000407594 1944 ntBASIC17.28■□□□□ 0.36
TRA2BP62995 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms