Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 KRT18P38-201ENST00000449496 1282 ntBASIC19.92■□□□□ 0.78
SNRPFP62306 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.92■□□□□ 0.78
SNRPFP62306 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SNRPFP62306 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNRPFP62306 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.92■□□□□ 0.78
SNRPFP62306 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SNRPFP62306 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNRPFP62306 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNRPFP62306 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNRPFP62306 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
SNRPFP62306 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNRPFP62306 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNRPFP62306 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.91■□□□□ 0.78
SNRPFP62306 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNRPFP62306 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNRPFP62306 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.91■□□□□ 0.78
SNRPFP62306 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.91■□□□□ 0.78
SNRPFP62306 MIR662-201ENST00000384847 95 ntBASIC19.91■□□□□ 0.78
SNRPFP62306 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SNRPFP62306 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.91■□□□□ 0.78
SNRPFP62306 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.91■□□□□ 0.78
SNRPFP62306 DUTP2-201ENST00000519164 463 ntBASIC19.91■□□□□ 0.78
SNRPFP62306 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.91■□□□□ 0.78
SNRPFP62306 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.91■□□□□ 0.78
SNRPFP62306 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SNRPFP62306 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SNRPFP62306 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.91■□□□□ 0.78
SNRPFP62306 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.91■□□□□ 0.78
SNRPFP62306 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.91■□□□□ 0.78
SNRPFP62306 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
SNRPFP62306 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.91■□□□□ 0.78
SNRPFP62306 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.91■□□□□ 0.78
SNRPFP62306 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNRPFP62306 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.91■□□□□ 0.78
SNRPFP62306 FLJ13224-201ENST00000313737 1514 ntBASIC19.91■□□□□ 0.78
SNRPFP62306 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SNRPFP62306 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNRPFP62306 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SNRPFP62306 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.9■□□□□ 0.78
SNRPFP62306 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.9■□□□□ 0.78
SNRPFP62306 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.9■□□□□ 0.78
SNRPFP62306 SLC25A6P5-201ENST00000435663 894 ntBASIC19.9■□□□□ 0.78
SNRPFP62306 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 AC112907.2-201ENST00000448639 330 ntBASIC19.9■□□□□ 0.78
SNRPFP62306 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.9■□□□□ 0.78
SNRPFP62306 AL359075.1-203ENST00000462729 1002 ntBASIC19.9■□□□□ 0.78
SNRPFP62306 AC092597.1-201ENST00000487352 616 ntBASIC19.9■□□□□ 0.78
SNRPFP62306 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.9■□□□□ 0.78
SNRPFP62306 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.9■□□□□ 0.78
SNRPFP62306 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.9■□□□□ 0.78
SNRPFP62306 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.9■□□□□ 0.78
SNRPFP62306 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.9■□□□□ 0.78
SNRPFP62306 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.9■□□□□ 0.78
SNRPFP62306 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SNRPFP62306 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPFP62306 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SNRPFP62306 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SNRPFP62306 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.89■□□□□ 0.77
SNRPFP62306 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.89■□□□□ 0.77
SNRPFP62306 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNRPFP62306 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.89■□□□□ 0.77
SNRPFP62306 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.89■□□□□ 0.77
SNRPFP62306 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNRPFP62306 KRT18P48-201ENST00000434763 852 ntBASIC19.89■□□□□ 0.77
SNRPFP62306 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNRPFP62306 KRT18P21-201ENST00000515767 1272 ntBASIC19.89■□□□□ 0.77
SNRPFP62306 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNRPFP62306 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNRPFP62306 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNRPFP62306 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNRPFP62306 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.89■□□□□ 0.77
SNRPFP62306 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.89■□□□□ 0.77
SNRPFP62306 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNRPFP62306 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.89■□□□□ 0.77
SNRPFP62306 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.89■□□□□ 0.77
SNRPFP62306 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.89■□□□□ 0.77
SNRPFP62306 NEFHP1-201ENST00000412845 2629 ntBASIC19.89■□□□□ 0.77
SNRPFP62306 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNRPFP62306 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SNRPFP62306 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNRPFP62306 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNRPFP62306 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms