Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP46P62068 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP46P62068 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP46P62068 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
USP46P62068 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.27■□□□□ 0.67
USP46P62068 SDHAP2-201ENST00000455183 2001 ntBASIC19.27■□□□□ 0.67
USP46P62068 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP46P62068 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP46P62068 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP46P62068 AC112777.1-201ENST00000540175 1423 ntBASIC19.26■□□□□ 0.67
USP46P62068 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
USP46P62068 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP46P62068 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
USP46P62068 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP46P62068 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP46P62068 MIR149-201ENST00000384879 89 ntBASIC19.26■□□□□ 0.67
USP46P62068 IGHGP-201ENST00000390555 1178 ntBASIC19.26■□□□□ 0.67
USP46P62068 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP46P62068 CHCHD2P8-201ENST00000429873 447 ntBASIC19.26■□□□□ 0.67
USP46P62068 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
USP46P62068 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP46P62068 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP46P62068 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.26■□□□□ 0.67
USP46P62068 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.26■□□□□ 0.67
USP46P62068 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
USP46P62068 AP002414.4-201ENST00000589764 1148 ntBASIC19.26■□□□□ 0.67
USP46P62068 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.26■□□□□ 0.67
USP46P62068 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP46P62068 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP46P62068 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
USP46P62068 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.26■□□□□ 0.67
USP46P62068 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP46P62068 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.26■□□□□ 0.67
USP46P62068 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP46P62068 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP46P62068 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
USP46P62068 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.26■□□□□ 0.67
USP46P62068 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP46P62068 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
USP46P62068 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP46P62068 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP46P62068 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP46P62068 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP46P62068 AC009102.3-201ENST00000623118 1491 ntBASIC19.25■□□□□ 0.67
USP46P62068 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP46P62068 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP46P62068 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.25■□□□□ 0.67
USP46P62068 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.25■□□□□ 0.67
USP46P62068 AC092329.2-201ENST00000598402 547 ntBASIC19.25■□□□□ 0.67
USP46P62068 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.25■□□□□ 0.67
USP46P62068 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP46P62068 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP46P62068 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.25■□□□□ 0.67
USP46P62068 NEFHP1-201ENST00000412845 2629 ntBASIC19.25■□□□□ 0.67
USP46P62068 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP46P62068 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP46P62068 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.25■□□□□ 0.67
USP46P62068 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP46P62068 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP46P62068 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
USP46P62068 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP46P62068 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP46P62068 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP46P62068 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.24■□□□□ 0.67
USP46P62068 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.24■□□□□ 0.67
USP46P62068 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP46P62068 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP46P62068 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
USP46P62068 TNXA-203ENST00000507684 2038 ntBASIC19.24■□□□□ 0.67
USP46P62068 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP46P62068 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
USP46P62068 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.24■□□□□ 0.67
USP46P62068 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP46P62068 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.24■□□□□ 0.67
USP46P62068 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.24■□□□□ 0.67
USP46P62068 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
USP46P62068 GPR32P1-201ENST00000601788 811 ntBASIC19.24■□□□□ 0.67
USP46P62068 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP46P62068 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP46P62068 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
USP46P62068 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.24■□□□□ 0.67
USP46P62068 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.24■□□□□ 0.67
USP46P62068 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP46P62068 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP46P62068 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP46P62068 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP46P62068 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.24■□□□□ 0.67
USP46P62068 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP46P62068 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP46P62068 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
USP46P62068 CROCCP3-202ENST00000420820 1947 ntBASIC19.23■□□□□ 0.67
USP46P62068 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP46P62068 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP46P62068 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP46P62068 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP46P62068 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP46P62068 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.23■□□□□ 0.67
USP46P62068 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.23■□□□□ 0.67
USP46P62068 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
USP46P62068 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms