Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CLDN20P56880 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN20P56880 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN20P56880 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN20P56880 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN20P56880 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.83■□□□□ 0.28
CLDN20P56880 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CLDN20P56880 AC140113.3-201ENST00000605663 199 ntBASIC16.83■□□□□ 0.28
CLDN20P56880 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN20P56880 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN20P56880 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN20P56880 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 AC067852.2-201ENST00000590513 2313 ntBASIC16.82■□□□□ 0.28
CLDN20P56880 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLDN20P56880 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN20P56880 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN20P56880 HEIH-201ENST00000623091 1652 ntBASIC16.82■□□□□ 0.28
CLDN20P56880 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.82■□□□□ 0.28
CLDN20P56880 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN20P56880 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN20P56880 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN20P56880 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN20P56880 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.82■□□□□ 0.28
CLDN20P56880 AL441883.1-201ENST00000566170 1045 ntBASIC16.82■□□□□ 0.28
CLDN20P56880 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 NEK4P2-201ENST00000580004 1012 ntBASIC16.82■□□□□ 0.28
CLDN20P56880 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLDN20P56880 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLDN20P56880 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLDN20P56880 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.82■□□□□ 0.28
CLDN20P56880 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN20P56880 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN20P56880 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN20P56880 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLDN20P56880 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN20P56880 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLDN20P56880 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CLDN20P56880 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN20P56880 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLDN20P56880 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLDN20P56880 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN20P56880 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.81■□□□□ 0.28
CLDN20P56880 RNF152P1-201ENST00000397754 604 ntBASIC16.81■□□□□ 0.28
CLDN20P56880 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.81■□□□□ 0.28
CLDN20P56880 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLDN20P56880 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.81■□□□□ 0.28
CLDN20P56880 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.81■□□□□ 0.28
CLDN20P56880 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.81■□□□□ 0.28
CLDN20P56880 AL031432.5-201ENST00000641059 760 ntBASIC16.81■□□□□ 0.28
CLDN20P56880 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLDN20P56880 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.81■□□□□ 0.28
CLDN20P56880 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
CLDN20P56880 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN20P56880 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms