Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
WNT3AP56704 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
WNT3AP56704 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
WNT3AP56704 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.55■□□□□ 0.56
WNT3AP56704 COX11P1-201ENST00000489116 835 ntBASIC18.55■□□□□ 0.56
WNT3AP56704 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
WNT3AP56704 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.55■□□□□ 0.56
WNT3AP56704 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
WNT3AP56704 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
WNT3AP56704 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
WNT3AP56704 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
WNT3AP56704 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
WNT3AP56704 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
WNT3AP56704 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
WNT3AP56704 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
WNT3AP56704 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
WNT3AP56704 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
WNT3AP56704 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
WNT3AP56704 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.54■□□□□ 0.56
WNT3AP56704 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
WNT3AP56704 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
WNT3AP56704 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
WNT3AP56704 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
WNT3AP56704 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
WNT3AP56704 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
WNT3AP56704 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
WNT3AP56704 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
WNT3AP56704 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
WNT3AP56704 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
WNT3AP56704 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
WNT3AP56704 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
WNT3AP56704 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
WNT3AP56704 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
WNT3AP56704 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
WNT3AP56704 BX664615.1-201ENST00000443558 458 ntBASIC18.54■□□□□ 0.56
WNT3AP56704 KRT18P57-201ENST00000443599 1254 ntBASIC18.54■□□□□ 0.56
WNT3AP56704 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.54■□□□□ 0.56
WNT3AP56704 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.54■□□□□ 0.56
WNT3AP56704 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
WNT3AP56704 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.54■□□□□ 0.56
WNT3AP56704 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.54■□□□□ 0.56
WNT3AP56704 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.54■□□□□ 0.56
WNT3AP56704 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.54■□□□□ 0.56
WNT3AP56704 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
WNT3AP56704 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.54■□□□□ 0.56
WNT3AP56704 AL157888.1-201ENST00000631930 593 ntBASIC18.54■□□□□ 0.56
WNT3AP56704 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
WNT3AP56704 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
WNT3AP56704 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
WNT3AP56704 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
WNT3AP56704 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.54■□□□□ 0.56
WNT3AP56704 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
WNT3AP56704 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
WNT3AP56704 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
WNT3AP56704 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
WNT3AP56704 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
WNT3AP56704 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
WNT3AP56704 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.53■□□□□ 0.56
WNT3AP56704 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.53■□□□□ 0.56
WNT3AP56704 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.53■□□□□ 0.56
WNT3AP56704 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.53■□□□□ 0.56
WNT3AP56704 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.53■□□□□ 0.56
WNT3AP56704 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.53■□□□□ 0.56
WNT3AP56704 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
WNT3AP56704 AL441883.1-201ENST00000566170 1045 ntBASIC18.53■□□□□ 0.56
WNT3AP56704 AC139887.4-201ENST00000607877 719 ntBASIC18.53■□□□□ 0.56
WNT3AP56704 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
WNT3AP56704 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
WNT3AP56704 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.53■□□□□ 0.56
WNT3AP56704 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
WNT3AP56704 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
WNT3AP56704 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.53■□□□□ 0.56
WNT3AP56704 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
WNT3AP56704 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
WNT3AP56704 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
WNT3AP56704 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
WNT3AP56704 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
WNT3AP56704 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
WNT3AP56704 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms