Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKN2DP55273 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKN2DP55273 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2DP55273 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2DP55273 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDKN2DP55273 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2DP55273 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.13■□□□□ 0.49
CDKN2DP55273 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.13■□□□□ 0.49
CDKN2DP55273 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.13■□□□□ 0.49
CDKN2DP55273 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.13■□□□□ 0.49
CDKN2DP55273 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.13■□□□□ 0.49
CDKN2DP55273 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2DP55273 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2DP55273 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2DP55273 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKN2DP55273 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2DP55273 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKN2DP55273 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.13■□□□□ 0.49
CDKN2DP55273 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2DP55273 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDKN2DP55273 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2DP55273 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2DP55273 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2DP55273 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKN2DP55273 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2DP55273 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKN2DP55273 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2DP55273 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKN2DP55273 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2DP55273 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2DP55273 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2DP55273 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2DP55273 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.12■□□□□ 0.49
CDKN2DP55273 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2DP55273 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.12■□□□□ 0.49
CDKN2DP55273 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2DP55273 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2DP55273 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKN2DP55273 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKN2DP55273 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2DP55273 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2DP55273 AC009947.2-201ENST00000444014 672 ntBASIC18.12■□□□□ 0.49
CDKN2DP55273 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKN2DP55273 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKN2DP55273 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.12■□□□□ 0.49
CDKN2DP55273 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKN2DP55273 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.12■□□□□ 0.49
CDKN2DP55273 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2DP55273 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2DP55273 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2DP55273 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
CDKN2DP55273 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2DP55273 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CDKN2DP55273 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKN2DP55273 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2DP55273 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2DP55273 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKN2DP55273 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2DP55273 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2DP55273 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2DP55273 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2DP55273 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2DP55273 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2DP55273 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2DP55273 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2DP55273 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.11■□□□□ 0.49
CDKN2DP55273 SEC1P-202ENST00000473944 940 ntBASIC18.11■□□□□ 0.49
CDKN2DP55273 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.11■□□□□ 0.49
CDKN2DP55273 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.11■□□□□ 0.49
CDKN2DP55273 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.11■□□□□ 0.49
CDKN2DP55273 AC010240.3-201ENST00000607688 395 ntBASIC18.11■□□□□ 0.49
CDKN2DP55273 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2DP55273 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2DP55273 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2DP55273 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDKN2DP55273 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2DP55273 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2DP55273 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDKN2DP55273 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.11■□□□□ 0.49
CDKN2DP55273 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKN2DP55273 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKN2DP55273 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CDKN2DP55273 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKN2DP55273 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKN2DP55273 AP000997.3-201ENST00000623333 2250 ntBASIC18.1■□□□□ 0.49
CDKN2DP55273 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKN2DP55273 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKN2DP55273 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKN2DP55273 AL024508.2-201ENST00000607749 1894 ntBASIC18.1■□□□□ 0.49
CDKN2DP55273 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKN2DP55273 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKN2DP55273 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKN2DP55273 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CDKN2DP55273 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKN2DP55273 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKN2DP55273 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKN2DP55273 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKN2DP55273 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKN2DP55273 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKN2DP55273 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms