Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
NCKAP1LP55160 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCKAP1LP55160 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NCKAP1LP55160 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCKAP1LP55160 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.06■□□□□ 0.8
NCKAP1LP55160 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.06■□□□□ 0.8
NCKAP1LP55160 PHGDH-209ENST00000641074 1780 ntBASIC20.06■□□□□ 0.8
NCKAP1LP55160 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.06■□□□□ 0.8
NCKAP1LP55160 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCKAP1LP55160 AC135776.1-201ENST00000319817 2481 ntBASIC20.06■□□□□ 0.8
NCKAP1LP55160 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCKAP1LP55160 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCKAP1LP55160 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCKAP1LP55160 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCKAP1LP55160 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.06■□□□□ 0.8
NCKAP1LP55160 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.06■□□□□ 0.8
NCKAP1LP55160 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.06■□□□□ 0.8
NCKAP1LP55160 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.06■□□□□ 0.8
NCKAP1LP55160 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.06■□□□□ 0.8
NCKAP1LP55160 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCKAP1LP55160 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NCKAP1LP55160 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NCKAP1LP55160 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NCKAP1LP55160 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCKAP1LP55160 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NCKAP1LP55160 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NCKAP1LP55160 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.06■□□□□ 0.8
NCKAP1LP55160 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NCKAP1LP55160 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
NCKAP1LP55160 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.06■□□□□ 0.8
NCKAP1LP55160 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCKAP1LP55160 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCKAP1LP55160 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NCKAP1LP55160 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCKAP1LP55160 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCKAP1LP55160 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCKAP1LP55160 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCKAP1LP55160 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCKAP1LP55160 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.05■□□□□ 0.8
NCKAP1LP55160 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCKAP1LP55160 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NCKAP1LP55160 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCKAP1LP55160 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.05■□□□□ 0.8
NCKAP1LP55160 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NCKAP1LP55160 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCKAP1LP55160 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCKAP1LP55160 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCKAP1LP55160 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCKAP1LP55160 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCKAP1LP55160 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.05■□□□□ 0.8
NCKAP1LP55160 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.05■□□□□ 0.8
NCKAP1LP55160 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.05■□□□□ 0.8
NCKAP1LP55160 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.05■□□□□ 0.8
NCKAP1LP55160 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.05■□□□□ 0.8
NCKAP1LP55160 AP003733.1-201ENST00000491725 852 ntBASIC20.05■□□□□ 0.8
NCKAP1LP55160 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCKAP1LP55160 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.05■□□□□ 0.8
NCKAP1LP55160 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.05■□□□□ 0.8
NCKAP1LP55160 RNF126P1-202ENST00000569893 925 ntBASIC20.05■□□□□ 0.8
NCKAP1LP55160 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.05■□□□□ 0.8
NCKAP1LP55160 AC116407.4-201ENST00000623319 1061 ntBASIC20.05■□□□□ 0.8
NCKAP1LP55160 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NCKAP1LP55160 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCKAP1LP55160 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCKAP1LP55160 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NCKAP1LP55160 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCKAP1LP55160 BICD1-207ENST00000551848 1962 ntBASIC20.04■□□□□ 0.8
NCKAP1LP55160 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCKAP1LP55160 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
NCKAP1LP55160 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCKAP1LP55160 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCKAP1LP55160 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCKAP1LP55160 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NCKAP1LP55160 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCKAP1LP55160 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCKAP1LP55160 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCKAP1LP55160 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
NCKAP1LP55160 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.04■□□□□ 0.8
NCKAP1LP55160 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
NCKAP1LP55160 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NCKAP1LP55160 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCKAP1LP55160 IGHGP-201ENST00000390555 1178 ntBASIC20.04■□□□□ 0.8
NCKAP1LP55160 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCKAP1LP55160 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.04■□□□□ 0.8
NCKAP1LP55160 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.04■□□□□ 0.8
NCKAP1LP55160 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NCKAP1LP55160 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCKAP1LP55160 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.04■□□□□ 0.8
NCKAP1LP55160 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCKAP1LP55160 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.04■□□□□ 0.8
NCKAP1LP55160 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
NCKAP1LP55160 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCKAP1LP55160 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.04■□□□□ 0.8
NCKAP1LP55160 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCKAP1LP55160 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NCKAP1LP55160 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCKAP1LP55160 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.03■□□□□ 0.8
NCKAP1LP55160 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.03■□□□□ 0.8
NCKAP1LP55160 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCKAP1LP55160 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms