Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.65■□□□□ 0.42
EPHA4P54764 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA4P54764 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA4P54764 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.65■□□□□ 0.42
EPHA4P54764 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA4P54764 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA4P54764 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
EPHA4P54764 AC233702.3-201ENST00000578656 1387 ntBASIC17.65■□□□□ 0.42
EPHA4P54764 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.65■□□□□ 0.42
EPHA4P54764 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
EPHA4P54764 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
EPHA4P54764 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
EPHA4P54764 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
EPHA4P54764 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.64■□□□□ 0.42
EPHA4P54764 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA4P54764 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.64■□□□□ 0.41
EPHA4P54764 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA4P54764 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA4P54764 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.64■□□□□ 0.41
EPHA4P54764 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA4P54764 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.64■□□□□ 0.41
EPHA4P54764 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA4P54764 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA4P54764 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.64■□□□□ 0.41
EPHA4P54764 AL121894.2-201ENST00000602977 491 ntBASIC17.64■□□□□ 0.41
EPHA4P54764 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.64■□□□□ 0.41
EPHA4P54764 AL121772.3-201ENST00000610840 674 ntBASIC17.64■□□□□ 0.41
EPHA4P54764 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA4P54764 AC004263.2-201ENST00000617183 678 ntBASIC17.64■□□□□ 0.41
EPHA4P54764 AC124864.1-201ENST00000623408 392 ntBASIC17.64■□□□□ 0.41
EPHA4P54764 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.64■□□□□ 0.41
EPHA4P54764 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA4P54764 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA4P54764 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA4P54764 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
EPHA4P54764 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA4P54764 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.64■□□□□ 0.41
EPHA4P54764 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA4P54764 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.64■□□□□ 0.41
EPHA4P54764 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.64■□□□□ 0.41
EPHA4P54764 SDHAP2-201ENST00000455183 2001 ntBASIC17.64■□□□□ 0.41
EPHA4P54764 TNXA-203ENST00000507684 2038 ntBASIC17.64■□□□□ 0.41
EPHA4P54764 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA4P54764 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.64■□□□□ 0.41
EPHA4P54764 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
EPHA4P54764 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.63■□□□□ 0.41
EPHA4P54764 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.63■□□□□ 0.41
EPHA4P54764 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.63■□□□□ 0.41
EPHA4P54764 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.63■□□□□ 0.41
EPHA4P54764 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.63■□□□□ 0.41
EPHA4P54764 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.63■□□□□ 0.41
EPHA4P54764 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.63■□□□□ 0.41
EPHA4P54764 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
EPHA4P54764 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 AC138932.1-201ENST00000534164 6830 ntBASIC17.63■□□□□ 0.41
EPHA4P54764 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA4P54764 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA4P54764 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA4P54764 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA4P54764 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
EPHA4P54764 AC026471.1-201ENST00000564629 3026 ntBASIC17.62■□□□□ 0.41
EPHA4P54764 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA4P54764 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA4P54764 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.62■□□□□ 0.41
EPHA4P54764 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA4P54764 TSPY19P-201ENST00000418461 509 ntBASIC17.62■□□□□ 0.41
EPHA4P54764 TSPY18P-201ENST00000441642 509 ntBASIC17.62■□□□□ 0.41
EPHA4P54764 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA4P54764 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.62■□□□□ 0.41
EPHA4P54764 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.62■□□□□ 0.41
EPHA4P54764 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.62■□□□□ 0.41
EPHA4P54764 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA4P54764 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
EPHA4P54764 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA4P54764 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.62■□□□□ 0.41
EPHA4P54764 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA4P54764 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA4P54764 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
EPHA4P54764 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms