Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.58■□□□□ 0.4
POLR2JP52435 MCCD1P1-208ENST00000445732 328 ntBASIC17.58■□□□□ 0.4
POLR2JP52435 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2JP52435 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2JP52435 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.58■□□□□ 0.4
POLR2JP52435 KRT18P6-201ENST00000555540 1265 ntBASIC17.58■□□□□ 0.4
POLR2JP52435 AF186192.3-201ENST00000583427 947 ntBASIC17.58■□□□□ 0.4
POLR2JP52435 AC073195.1-201ENST00000607241 877 ntBASIC17.58■□□□□ 0.4
POLR2JP52435 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
POLR2JP52435 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
POLR2JP52435 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2JP52435 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
POLR2JP52435 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2JP52435 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
POLR2JP52435 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
POLR2JP52435 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2JP52435 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2JP52435 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2JP52435 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.57■□□□□ 0.4
POLR2JP52435 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2JP52435 KRT8P50-201ENST00000562022 1438 ntBASIC17.57■□□□□ 0.4
POLR2JP52435 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.57■□□□□ 0.4
POLR2JP52435 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2JP52435 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
POLR2JP52435 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2JP52435 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.57■□□□□ 0.4
POLR2JP52435 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2JP52435 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.57■□□□□ 0.4
POLR2JP52435 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
POLR2JP52435 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.57■□□□□ 0.4
POLR2JP52435 AC006058.3-201ENST00000606217 1069 ntBASIC17.57■□□□□ 0.4
POLR2JP52435 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2JP52435 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2JP52435 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2JP52435 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.57■□□□□ 0.4
POLR2JP52435 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2JP52435 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2JP52435 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
POLR2JP52435 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
POLR2JP52435 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2JP52435 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
POLR2JP52435 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2JP52435 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.56■□□□□ 0.4
POLR2JP52435 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR2JP52435 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
POLR2JP52435 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
POLR2JP52435 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR2JP52435 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2JP52435 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
POLR2JP52435 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2JP52435 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR2JP52435 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR2JP52435 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2JP52435 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.56■□□□□ 0.4
POLR2JP52435 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR2JP52435 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR2JP52435 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.56■□□□□ 0.4
POLR2JP52435 C1QBPP2-201ENST00000528754 825 ntBASIC17.56■□□□□ 0.4
POLR2JP52435 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.56■□□□□ 0.4
POLR2JP52435 AP000692.2-201ENST00000608391 879 ntBASIC17.56■□□□□ 0.4
POLR2JP52435 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
POLR2JP52435 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2JP52435 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
POLR2JP52435 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2JP52435 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
POLR2JP52435 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2JP52435 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2JP52435 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
POLR2JP52435 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2JP52435 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2JP52435 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.55■□□□□ 0.4
POLR2JP52435 GPAT2P1-201ENST00000444924 1672 ntBASIC17.55■□□□□ 0.4
POLR2JP52435 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2JP52435 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2JP52435 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.55■□□□□ 0.4
POLR2JP52435 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2JP52435 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2JP52435 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR2JP52435 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.55■□□□□ 0.4
POLR2JP52435 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.55■□□□□ 0.4
POLR2JP52435 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.55■□□□□ 0.4
POLR2JP52435 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
POLR2JP52435 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2JP52435 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2JP52435 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2JP52435 FSCN1P1-201ENST00000568912 1481 ntBASIC17.55■□□□□ 0.4
POLR2JP52435 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2JP52435 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
POLR2JP52435 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
POLR2JP52435 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
POLR2JP52435 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.54■□□□□ 0.4
POLR2JP52435 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
POLR2JP52435 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms