Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLCSP50747 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.55■□□□□ 0.4
HLCSP50747 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.55■□□□□ 0.4
HLCSP50747 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.55■□□□□ 0.4
HLCSP50747 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLCSP50747 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLCSP50747 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLCSP50747 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLCSP50747 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLCSP50747 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HLCSP50747 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLCSP50747 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLCSP50747 TSPY21P-201ENST00000433481 731 ntBASIC17.55■□□□□ 0.4
HLCSP50747 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.55■□□□□ 0.4
HLCSP50747 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLCSP50747 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLCSP50747 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.55■□□□□ 0.4
HLCSP50747 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLCSP50747 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
HLCSP50747 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.55■□□□□ 0.4
HLCSP50747 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.55■□□□□ 0.4
HLCSP50747 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.55■□□□□ 0.4
HLCSP50747 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLCSP50747 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.55■□□□□ 0.4
HLCSP50747 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLCSP50747 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HLCSP50747 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HLCSP50747 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.55■□□□□ 0.4
HLCSP50747 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLCSP50747 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLCSP50747 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HLCSP50747 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HLCSP50747 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLCSP50747 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLCSP50747 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLCSP50747 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLCSP50747 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.54■□□□□ 0.4
HLCSP50747 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLCSP50747 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLCSP50747 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HLCSP50747 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLCSP50747 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.54■□□□□ 0.4
HLCSP50747 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLCSP50747 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.54■□□□□ 0.4
HLCSP50747 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLCSP50747 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLCSP50747 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.54■□□□□ 0.4
HLCSP50747 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLCSP50747 BX664615.1-201ENST00000443558 458 ntBASIC17.54■□□□□ 0.4
HLCSP50747 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.54■□□□□ 0.4
HLCSP50747 AL590326.2-201ENST00000625139 305 ntBASIC17.54■□□□□ 0.4
HLCSP50747 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLCSP50747 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLCSP50747 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.54■□□□□ 0.4
HLCSP50747 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLCSP50747 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HLCSP50747 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLCSP50747 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLCSP50747 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLCSP50747 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.54■□□□□ 0.4
HLCSP50747 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLCSP50747 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.53■□□□□ 0.4
HLCSP50747 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLCSP50747 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLCSP50747 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLCSP50747 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLCSP50747 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLCSP50747 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLCSP50747 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLCSP50747 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLCSP50747 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLCSP50747 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
HLCSP50747 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLCSP50747 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLCSP50747 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
HLCSP50747 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.53■□□□□ 0.4
HLCSP50747 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.53■□□□□ 0.4
HLCSP50747 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.53■□□□□ 0.4
HLCSP50747 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
HLCSP50747 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.53■□□□□ 0.4
HLCSP50747 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.53■□□□□ 0.4
HLCSP50747 AL512604.3-201ENST00000569583 964 ntBASIC17.53■□□□□ 0.4
HLCSP50747 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.53■□□□□ 0.4
HLCSP50747 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.53■□□□□ 0.4
HLCSP50747 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.53■□□□□ 0.4
HLCSP50747 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLCSP50747 SDHAP1-207ENST00000440850 2000 ntBASIC17.53■□□□□ 0.4
HLCSP50747 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLCSP50747 AC073592.3-201ENST00000625118 1834 ntBASIC17.53■□□□□ 0.4
HLCSP50747 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLCSP50747 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLCSP50747 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLCSP50747 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.53■□□□□ 0.4
HLCSP50747 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HLCSP50747 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HLCSP50747 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLCSP50747 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.53■□□□□ 0.4
HLCSP50747 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HLCSP50747 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLCSP50747 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms