Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.63■□□□□ 0.89
CENPFP49454 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.63■□□□□ 0.89
CENPFP49454 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CENPFP49454 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CENPFP49454 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CENPFP49454 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CENPFP49454 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CENPFP49454 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.63■□□□□ 0.89
CENPFP49454 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CENPFP49454 BCRP1-201ENST00000444246 691 ntBASIC20.63■□□□□ 0.89
CENPFP49454 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.63■□□□□ 0.89
CENPFP49454 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.62■□□□□ 0.89
CENPFP49454 AL356309.3-201ENST00000624132 1934 ntBASIC20.62■□□□□ 0.89
CENPFP49454 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.62■□□□□ 0.89
CENPFP49454 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CENPFP49454 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.62■□□□□ 0.89
CENPFP49454 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CENPFP49454 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.62■□□□□ 0.89
CENPFP49454 AC002310.6-201ENST00000624451 1377 ntBASIC20.62■□□□□ 0.89
CENPFP49454 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CENPFP49454 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CENPFP49454 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CENPFP49454 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.62■□□□□ 0.89
CENPFP49454 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.62■□□□□ 0.89
CENPFP49454 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.62■□□□□ 0.89
CENPFP49454 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.62■□□□□ 0.89
CENPFP49454 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CENPFP49454 AL049812.1-201ENST00000432563 2267 ntBASIC20.62■□□□□ 0.89
CENPFP49454 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.62■□□□□ 0.89
CENPFP49454 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.62■□□□□ 0.89
CENPFP49454 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CENPFP49454 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CENPFP49454 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.61■□□□□ 0.89
CENPFP49454 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CENPFP49454 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.61■□□□□ 0.89
CENPFP49454 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.61■□□□□ 0.89
CENPFP49454 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CENPFP49454 AC012645.4-201ENST00000610691 1061 ntBASIC20.61■□□□□ 0.89
CENPFP49454 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CENPFP49454 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CENPFP49454 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CENPFP49454 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CENPFP49454 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CENPFP49454 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CENPFP49454 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CENPFP49454 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CENPFP49454 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.61■□□□□ 0.89
CENPFP49454 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CENPFP49454 MIR770-201ENST00000390219 98 ntBASIC20.61■□□□□ 0.89
CENPFP49454 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.61■□□□□ 0.89
CENPFP49454 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CENPFP49454 FP475955.4-201ENST00000623131 1990 ntBASIC20.61■□□□□ 0.89
CENPFP49454 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CENPFP49454 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.61■□□□□ 0.89
CENPFP49454 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CENPFP49454 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CENPFP49454 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CENPFP49454 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.61■□□□□ 0.89
CENPFP49454 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
CENPFP49454 AC138761.1-201ENST00000584393 385 ntBASIC20.61■□□□□ 0.89
CENPFP49454 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CENPFP49454 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CENPFP49454 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CENPFP49454 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.6■□□□□ 0.89
CENPFP49454 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CENPFP49454 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CENPFP49454 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.6■□□□□ 0.89
CENPFP49454 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.6■□□□□ 0.89
CENPFP49454 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.6■□□□□ 0.89
CENPFP49454 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.6■□□□□ 0.89
CENPFP49454 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CENPFP49454 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CENPFP49454 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CENPFP49454 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CENPFP49454 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.6■□□□□ 0.89
CENPFP49454 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CENPFP49454 AP002472.1-201ENST00000577490 586 ntBASIC20.6■□□□□ 0.89
CENPFP49454 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.6■□□□□ 0.89
CENPFP49454 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPFP49454 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPFP49454 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.59■□□□□ 0.89
CENPFP49454 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.59■□□□□ 0.89
CENPFP49454 AC011467.4-201ENST00000594891 528 ntBASIC20.59■□□□□ 0.89
CENPFP49454 IRX1P1-201ENST00000438849 1838 ntBASIC20.59■□□□□ 0.89
CENPFP49454 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.59■□□□□ 0.89
CENPFP49454 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPFP49454 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.59■□□□□ 0.89
CENPFP49454 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPFP49454 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.59■□□□□ 0.89
CENPFP49454 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPFP49454 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPFP49454 AL139400.1-201ENST00000366220 510 ntBASIC20.59■□□□□ 0.89
CENPFP49454 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
CENPFP49454 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.59■□□□□ 0.89
CENPFP49454 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CENPFP49454 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.59■□□□□ 0.89
CENPFP49454 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.59■□□□□ 0.89
CENPFP49454 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPFP49454 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CENPFP49454 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms