Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX1P48742 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LHX1P48742 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LHX1P48742 AC093503.3-201ENST00000624917 2352 ntBASIC19.39■□□□□ 0.69
LHX1P48742 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
LHX1P48742 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LHX1P48742 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX1P48742 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX1P48742 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX1P48742 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX1P48742 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.39■□□□□ 0.69
LHX1P48742 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LHX1P48742 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.39■□□□□ 0.69
LHX1P48742 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LHX1P48742 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.39■□□□□ 0.69
LHX1P48742 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
LHX1P48742 MIR3180-1-201ENST00000580374 94 ntBASIC19.39■□□□□ 0.69
LHX1P48742 MIR3180-3-201ENST00000584616 94 ntBASIC19.39■□□□□ 0.69
LHX1P48742 AC092119.3-201ENST00000612618 583 ntBASIC19.39■□□□□ 0.69
LHX1P48742 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LHX1P48742 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.39■□□□□ 0.69
LHX1P48742 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX1P48742 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
LHX1P48742 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LHX1P48742 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LHX1P48742 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.39■□□□□ 0.69
LHX1P48742 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.39■□□□□ 0.69
LHX1P48742 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LHX1P48742 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LHX1P48742 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LHX1P48742 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LHX1P48742 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LHX1P48742 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
LHX1P48742 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LHX1P48742 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LHX1P48742 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.38■□□□□ 0.69
LHX1P48742 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LHX1P48742 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LHX1P48742 DRAXINP1-201ENST00000437611 948 ntBASIC19.38■□□□□ 0.69
LHX1P48742 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LHX1P48742 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LHX1P48742 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LHX1P48742 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LHX1P48742 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.38■□□□□ 0.69
LHX1P48742 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.38■□□□□ 0.69
LHX1P48742 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LHX1P48742 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.38■□□□□ 0.69
LHX1P48742 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.38■□□□□ 0.69
LHX1P48742 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.38■□□□□ 0.69
LHX1P48742 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.38■□□□□ 0.69
LHX1P48742 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LHX1P48742 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LHX1P48742 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LHX1P48742 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LHX1P48742 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LHX1P48742 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.37■□□□□ 0.69
LHX1P48742 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.37■□□□□ 0.69
LHX1P48742 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX1P48742 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LHX1P48742 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.37■□□□□ 0.69
LHX1P48742 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX1P48742 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
LHX1P48742 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX1P48742 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LHX1P48742 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LHX1P48742 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX1P48742 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX1P48742 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX1P48742 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LHX1P48742 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX1P48742 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.37■□□□□ 0.69
LHX1P48742 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
LHX1P48742 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LHX1P48742 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.37■□□□□ 0.69
LHX1P48742 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.37■□□□□ 0.69
LHX1P48742 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.37■□□□□ 0.69
LHX1P48742 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.37■□□□□ 0.69
LHX1P48742 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.37■□□□□ 0.69
LHX1P48742 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX1P48742 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX1P48742 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX1P48742 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
LHX1P48742 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.37■□□□□ 0.69
LHX1P48742 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX1P48742 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX1P48742 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX1P48742 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX1P48742 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX1P48742 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX1P48742 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
LHX1P48742 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LHX1P48742 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.36■□□□□ 0.69
LHX1P48742 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.36■□□□□ 0.69
LHX1P48742 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LHX1P48742 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LHX1P48742 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LHX1P48742 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX1P48742 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.36■□□□□ 0.69
LHX1P48742 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX1P48742 RN7SL606P-201ENST00000472779 293 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms