Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HADHAP40939 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.58■□□□□ 0.56
HADHAP40939 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HADHAP40939 FAM87A-204ENST00000613235 858 ntBASIC18.58■□□□□ 0.56
HADHAP40939 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HADHAP40939 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
HADHAP40939 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HADHAP40939 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HADHAP40939 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HADHAP40939 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HADHAP40939 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HADHAP40939 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HADHAP40939 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HADHAP40939 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
HADHAP40939 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HADHAP40939 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.58■□□□□ 0.56
HADHAP40939 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HADHAP40939 HOXB1-202ENST00000577092 1414 ntBASIC18.57■□□□□ 0.56
HADHAP40939 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
HADHAP40939 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.57■□□□□ 0.56
HADHAP40939 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.57■□□□□ 0.56
HADHAP40939 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HADHAP40939 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HADHAP40939 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HADHAP40939 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HADHAP40939 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HADHAP40939 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HADHAP40939 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.57■□□□□ 0.56
HADHAP40939 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
HADHAP40939 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HADHAP40939 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HADHAP40939 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HADHAP40939 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.57■□□□□ 0.56
HADHAP40939 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
HADHAP40939 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.57■□□□□ 0.56
HADHAP40939 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.57■□□□□ 0.56
HADHAP40939 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.57■□□□□ 0.56
HADHAP40939 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.57■□□□□ 0.56
HADHAP40939 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.57■□□□□ 0.56
HADHAP40939 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
HADHAP40939 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HADHAP40939 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.57■□□□□ 0.56
HADHAP40939 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HADHAP40939 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HADHAP40939 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HADHAP40939 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HADHAP40939 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.57■□□□□ 0.56
HADHAP40939 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.56■□□□□ 0.56
HADHAP40939 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.56■□□□□ 0.56
HADHAP40939 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.56■□□□□ 0.56
HADHAP40939 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HADHAP40939 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
HADHAP40939 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
HADHAP40939 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HADHAP40939 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.56■□□□□ 0.56
HADHAP40939 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.56■□□□□ 0.56
HADHAP40939 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.56■□□□□ 0.56
HADHAP40939 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
HADHAP40939 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HADHAP40939 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.56■□□□□ 0.56
HADHAP40939 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
HADHAP40939 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.56■□□□□ 0.56
HADHAP40939 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HADHAP40939 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HADHAP40939 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.56■□□□□ 0.56
HADHAP40939 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
HADHAP40939 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.56■□□□□ 0.56
HADHAP40939 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.56■□□□□ 0.56
HADHAP40939 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HADHAP40939 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 MYLKP1-201ENST00000509077 1580 ntBASIC18.55■□□□□ 0.56
HADHAP40939 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HADHAP40939 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.55■□□□□ 0.56
HADHAP40939 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HADHAP40939 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms