Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC23.2■■□□□ 1.3
COL15A1P39059 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC23.2■■□□□ 1.3
COL15A1P39059 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC23.2■■□□□ 1.3
COL15A1P39059 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC23.2■■□□□ 1.3
COL15A1P39059 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL15A1P39059 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL15A1P39059 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL15A1P39059 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL15A1P39059 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL15A1P39059 AC112777.1-201ENST00000540175 1423 ntBASIC23.2■■□□□ 1.3
COL15A1P39059 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC23.2■■□□□ 1.3
COL15A1P39059 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL15A1P39059 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL15A1P39059 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.2■■□□□ 1.3
COL15A1P39059 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL15A1P39059 SNAI3-AS1-205ENST00000568633 2096 ntBASIC23.2■■□□□ 1.3
COL15A1P39059 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
COL15A1P39059 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL15A1P39059 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL15A1P39059 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC23.19■■□□□ 1.3
COL15A1P39059 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
COL15A1P39059 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL15A1P39059 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
COL15A1P39059 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
COL15A1P39059 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC23.19■■□□□ 1.3
COL15A1P39059 POLD2P1-201ENST00000511220 997 ntBASIC23.19■■□□□ 1.3
COL15A1P39059 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COL15A1P39059 AC009102.3-201ENST00000623118 1491 ntBASIC23.19■■□□□ 1.3
COL15A1P39059 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC23.19■■□□□ 1.3
COL15A1P39059 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC23.19■■□□□ 1.3
COL15A1P39059 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL15A1P39059 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
COL15A1P39059 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL15A1P39059 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL15A1P39059 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL15A1P39059 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.18■■□□□ 1.3
COL15A1P39059 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
COL15A1P39059 AC093909.1-201ENST00000504731 1122 ntBASIC23.18■■□□□ 1.3
COL15A1P39059 AC073648.2-201ENST00000510116 352 ntBASIC23.18■■□□□ 1.3
COL15A1P39059 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL15A1P39059 RPL18-209ENST00000550645 463 ntTSL 5 BASIC23.18■■□□□ 1.3
COL15A1P39059 RPL18-214ENST00000552588 559 ntTSL 3 BASIC23.18■■□□□ 1.3
COL15A1P39059 AC139887.3-201ENST00000568585 713 ntBASIC23.18■■□□□ 1.3
COL15A1P39059 LITAF-211ENST00000572255 516 ntTSL 4 BASIC23.18■■□□□ 1.3
COL15A1P39059 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
COL15A1P39059 AP001269.4-201ENST00000609611 512 ntBASIC23.18■■□□□ 1.3
COL15A1P39059 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
COL15A1P39059 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL15A1P39059 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL15A1P39059 TP73-AS1-210ENST00000637775 1455 ntBASIC23.18■■□□□ 1.3
COL15A1P39059 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
COL15A1P39059 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL15A1P39059 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL15A1P39059 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL15A1P39059 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL15A1P39059 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL15A1P39059 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL15A1P39059 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 HIST2H3DP1-201ENST00000401004 416 ntBASIC23.17■■□□□ 1.3
COL15A1P39059 RBM17P3-201ENST00000417687 1192 ntBASIC23.17■■□□□ 1.3
COL15A1P39059 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC23.17■■□□□ 1.3
COL15A1P39059 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC23.17■■□□□ 1.3
COL15A1P39059 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC23.17■■□□□ 1.3
COL15A1P39059 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC23.17■■□□□ 1.3
COL15A1P39059 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC23.17■■□□□ 1.3
COL15A1P39059 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
COL15A1P39059 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 GZMM-202ENST00000592501 941 ntTSL 3 BASIC23.17■■□□□ 1.3
COL15A1P39059 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
COL15A1P39059 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC23.17■■□□□ 1.3
COL15A1P39059 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL15A1P39059 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL15A1P39059 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
COL15A1P39059 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL15A1P39059 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC23.16■■□□□ 1.3
COL15A1P39059 AC008687.5-201ENST00000593746 558 ntBASIC23.16■■□□□ 1.3
COL15A1P39059 FAM215A-202ENST00000632077 792 ntBASIC23.16■■□□□ 1.3
COL15A1P39059 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
COL15A1P39059 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL15A1P39059 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms