Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.55■■□□□ 1.2
PDE6BP35913 AL024508.2-201ENST00000607749 1894 ntBASIC22.55■■□□□ 1.2
PDE6BP35913 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDE6BP35913 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDE6BP35913 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDE6BP35913 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PDE6BP35913 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDE6BP35913 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.54■■□□□ 1.2
PDE6BP35913 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
PDE6BP35913 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDE6BP35913 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDE6BP35913 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDE6BP35913 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC22.54■■□□□ 1.2
PDE6BP35913 DHDH-204ENST00000523250 634 ntTSL 5 BASIC22.54■■□□□ 1.2
PDE6BP35913 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC22.54■■□□□ 1.2
PDE6BP35913 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC22.54■■□□□ 1.2
PDE6BP35913 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC22.54■■□□□ 1.2
PDE6BP35913 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC22.54■■□□□ 1.2
PDE6BP35913 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDE6BP35913 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PDE6BP35913 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.54■■□□□ 1.2
PDE6BP35913 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDE6BP35913 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDE6BP35913 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC22.53■■□□□ 1.2
PDE6BP35913 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC22.53■■□□□ 1.2
PDE6BP35913 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDE6BP35913 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC22.53■■□□□ 1.2
PDE6BP35913 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC22.53■■□□□ 1.2
PDE6BP35913 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PDE6BP35913 AC105339.3-201ENST00000560043 636 ntBASIC22.53■■□□□ 1.2
PDE6BP35913 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDE6BP35913 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDE6BP35913 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC22.53■■□□□ 1.2
PDE6BP35913 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PDE6BP35913 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PDE6BP35913 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PDE6BP35913 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.52■■□□□ 1.2
PDE6BP35913 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE6BP35913 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.52■■□□□ 1.2
PDE6BP35913 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.52■■□□□ 1.2
PDE6BP35913 SDHAP2-201ENST00000455183 2001 ntBASIC22.52■■□□□ 1.2
PDE6BP35913 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE6BP35913 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE6BP35913 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC22.52■■□□□ 1.2
PDE6BP35913 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDE6BP35913 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE6BP35913 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDE6BP35913 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE6BP35913 RPS8P6-201ENST00000426177 609 ntBASIC22.52■■□□□ 1.2
PDE6BP35913 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDE6BP35913 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC22.52■■□□□ 1.2
PDE6BP35913 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PDE6BP35913 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDE6BP35913 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE6BP35913 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PDE6BP35913 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDE6BP35913 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE6BP35913 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE6BP35913 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC22.52■■□□□ 1.19
PDE6BP35913 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC22.52■■□□□ 1.19
PDE6BP35913 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE6BP35913 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE6BP35913 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE6BP35913 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDE6BP35913 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.51■■□□□ 1.19
PDE6BP35913 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE6BP35913 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
PDE6BP35913 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.51■■□□□ 1.19
PDE6BP35913 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PDE6BP35913 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PDE6BP35913 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PDE6BP35913 SOD2-201ENST00000337404 991 ntTSL 2 BASIC22.51■■□□□ 1.19
PDE6BP35913 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE6BP35913 PMP22-202ENST00000395936 816 ntTSL 3 BASIC22.51■■□□□ 1.19
PDE6BP35913 AC004967.1-201ENST00000453589 447 ntBASIC22.51■■□□□ 1.19
PDE6BP35913 RNA5SP416-201ENST00000516838 111 ntBASIC22.51■■□□□ 1.19
PDE6BP35913 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDE6BP35913 AC107918.4-202ENST00000641623 219 ntBASIC22.51■■□□□ 1.19
PDE6BP35913 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC22.51■■□□□ 1.19
PDE6BP35913 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDE6BP35913 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.51■■□□□ 1.19
PDE6BP35913 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE6BP35913 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDE6BP35913 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDE6BP35913 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDE6BP35913 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDE6BP35913 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDE6BP35913 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDE6BP35913 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDE6BP35913 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDE6BP35913 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.5■■□□□ 1.19
PDE6BP35913 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.5■■□□□ 1.19
PDE6BP35913 HS6ST1P1-201ENST00000481504 1234 ntBASIC22.5■■□□□ 1.19
PDE6BP35913 UNC93B6-202ENST00000528242 690 ntBASIC22.5■■□□□ 1.19
PDE6BP35913 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC22.5■■□□□ 1.19
PDE6BP35913 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC22.5■■□□□ 1.19
PDE6BP35913 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC22.5■■□□□ 1.19
PDE6BP35913 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC22.5■■□□□ 1.19
PDE6BP35913 AC027796.2-201ENST00000575326 344 ntBASIC22.5■■□□□ 1.19
PDE6BP35913 NKAPP1-205ENST00000585790 367 ntBASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms