Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.32■□□□□ 0.68
PCK1P35558 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.32■□□□□ 0.68
PCK1P35558 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.32■□□□□ 0.68
PCK1P35558 NAPSB-206ENST00000562112 1266 ntBASIC19.32■□□□□ 0.68
PCK1P35558 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCK1P35558 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PCK1P35558 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
PCK1P35558 AC066615.1-201ENST00000640911 628 ntBASIC19.32■□□□□ 0.68
PCK1P35558 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCK1P35558 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCK1P35558 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCK1P35558 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PCK1P35558 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.32■□□□□ 0.68
PCK1P35558 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.32■□□□□ 0.68
PCK1P35558 AL390961.4-201ENST00000623958 2535 ntBASIC19.31■□□□□ 0.68
PCK1P35558 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCK1P35558 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCK1P35558 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCK1P35558 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCK1P35558 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.31■□□□□ 0.68
PCK1P35558 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCK1P35558 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PCK1P35558 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCK1P35558 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCK1P35558 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCK1P35558 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCK1P35558 AC128688.1-201ENST00000487626 519 ntBASIC19.31■□□□□ 0.68
PCK1P35558 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.31■□□□□ 0.68
PCK1P35558 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.31■□□□□ 0.68
PCK1P35558 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.31■□□□□ 0.68
PCK1P35558 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.31■□□□□ 0.68
PCK1P35558 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCK1P35558 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCK1P35558 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.31■□□□□ 0.68
PCK1P35558 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
PCK1P35558 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCK1P35558 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCK1P35558 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCK1P35558 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCK1P35558 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCK1P35558 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCK1P35558 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCK1P35558 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.31■□□□□ 0.68
PCK1P35558 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PCK1P35558 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.3■□□□□ 0.68
PCK1P35558 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.3■□□□□ 0.68
PCK1P35558 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.3■□□□□ 0.68
PCK1P35558 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PCK1P35558 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
PCK1P35558 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCK1P35558 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCK1P35558 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
PCK1P35558 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCK1P35558 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCK1P35558 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCK1P35558 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCK1P35558 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCK1P35558 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCK1P35558 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCK1P35558 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCK1P35558 INGX-201ENST00000359239 846 ntBASIC19.3■□□□□ 0.68
PCK1P35558 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCK1P35558 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.3■□□□□ 0.68
PCK1P35558 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PCK1P35558 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
PCK1P35558 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCK1P35558 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.3■□□□□ 0.68
PCK1P35558 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCK1P35558 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.3■□□□□ 0.68
PCK1P35558 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCK1P35558 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PCK1P35558 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCK1P35558 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCK1P35558 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCK1P35558 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCK1P35558 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.3■□□□□ 0.68
PCK1P35558 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCK1P35558 ABALON-201ENST00000629058 1903 ntBASIC19.29■□□□□ 0.68
PCK1P35558 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.29■□□□□ 0.68
PCK1P35558 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCK1P35558 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCK1P35558 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCK1P35558 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCK1P35558 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.29■□□□□ 0.68
PCK1P35558 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCK1P35558 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCK1P35558 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
PCK1P35558 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.29■□□□□ 0.68
PCK1P35558 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.29■□□□□ 0.68
PCK1P35558 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.29■□□□□ 0.68
PCK1P35558 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.29■□□□□ 0.68
PCK1P35558 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCK1P35558 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCK1P35558 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.29■□□□□ 0.68
PCK1P35558 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PCK1P35558 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
PCK1P35558 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCK1P35558 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCK1P35558 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCK1P35558 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms