Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC23■■□□□ 1.27
RFC4P35249 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC23■■□□□ 1.27
RFC4P35249 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFC4P35249 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFC4P35249 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
RFC4P35249 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23■■□□□ 1.27
RFC4P35249 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFC4P35249 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23■■□□□ 1.27
RFC4P35249 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFC4P35249 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
RFC4P35249 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
RFC4P35249 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RFC4P35249 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RFC4P35249 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RFC4P35249 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
RFC4P35249 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RFC4P35249 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC22.99■■□□□ 1.27
RFC4P35249 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RFC4P35249 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RFC4P35249 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RFC4P35249 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
RFC4P35249 HNRNPA1P28-201ENST00000424481 961 ntBASIC22.99■■□□□ 1.27
RFC4P35249 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC22.99■■□□□ 1.27
RFC4P35249 FIS1-203ENST00000442303 631 ntTSL 3 BASIC22.99■■□□□ 1.27
RFC4P35249 DHDH-204ENST00000523250 634 ntTSL 5 BASIC22.99■■□□□ 1.27
RFC4P35249 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC22.99■■□□□ 1.27
RFC4P35249 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC22.99■■□□□ 1.27
RFC4P35249 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC22.99■■□□□ 1.27
RFC4P35249 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC22.99■■□□□ 1.27
RFC4P35249 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
RFC4P35249 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RFC4P35249 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
RFC4P35249 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC22.99■■□□□ 1.27
RFC4P35249 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RFC4P35249 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC22.99■■□□□ 1.27
RFC4P35249 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RFC4P35249 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.99■■□□□ 1.27
RFC4P35249 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.99■■□□□ 1.27
RFC4P35249 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RFC4P35249 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RFC4P35249 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
RFC4P35249 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC22.98■■□□□ 1.27
RFC4P35249 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
RFC4P35249 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RFC4P35249 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RFC4P35249 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RFC4P35249 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RFC4P35249 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC22.98■■□□□ 1.27
RFC4P35249 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC22.98■■□□□ 1.27
RFC4P35249 AC040169.1-201ENST00000565382 521 ntBASIC22.98■■□□□ 1.27
RFC4P35249 AC008735.5-201ENST00000623544 497 ntBASIC22.98■■□□□ 1.27
RFC4P35249 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
RFC4P35249 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RFC4P35249 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RFC4P35249 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.98■■□□□ 1.27
RFC4P35249 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.98■■□□□ 1.27
RFC4P35249 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
RFC4P35249 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RFC4P35249 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RFC4P35249 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RFC4P35249 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC22.97■■□□□ 1.27
RFC4P35249 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
RFC4P35249 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC22.97■■□□□ 1.27
RFC4P35249 AL024508.2-201ENST00000607749 1894 ntBASIC22.97■■□□□ 1.27
RFC4P35249 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RFC4P35249 DNAJB3-201ENST00000446806 729 ntBASIC22.97■■□□□ 1.27
RFC4P35249 URGCP-206ENST00000446958 365 ntTSL 2 BASIC22.97■■□□□ 1.27
RFC4P35249 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC22.97■■□□□ 1.27
RFC4P35249 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC22.97■■□□□ 1.27
RFC4P35249 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC22.97■■□□□ 1.27
RFC4P35249 AC027796.2-201ENST00000575326 344 ntBASIC22.97■■□□□ 1.27
RFC4P35249 AC083906.6-201ENST00000641366 219 ntBASIC22.97■■□□□ 1.27
RFC4P35249 AC079781.4-201ENST00000641908 219 ntBASIC22.97■■□□□ 1.27
RFC4P35249 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RFC4P35249 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.97■■□□□ 1.27
RFC4P35249 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RFC4P35249 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
RFC4P35249 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RFC4P35249 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.97■■□□□ 1.27
RFC4P35249 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RFC4P35249 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RFC4P35249 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RFC4P35249 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.97■■□□□ 1.27
RFC4P35249 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RFC4P35249 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RFC4P35249 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RFC4P35249 SDHAP2-201ENST00000455183 2001 ntBASIC22.96■■□□□ 1.27
RFC4P35249 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
RFC4P35249 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RFC4P35249 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RFC4P35249 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC22.96■■□□□ 1.27
RFC4P35249 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
RFC4P35249 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
RFC4P35249 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC22.96■■□□□ 1.27
RFC4P35249 AL139288.1-201ENST00000623748 933 ntBASIC22.96■■□□□ 1.27
RFC4P35249 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RFC4P35249 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RFC4P35249 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RFC4P35249 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
RFC4P35249 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms